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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 2
  • peroxisome 1
  • plastid 1
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:extracellular, nucleus, plastid
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 97.2 97.2
HORVU7Hr1G078320.1 Barley cytosol 74.3 73.61
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 78.04 73.57
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 73.83 73.15
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 73.83 73.15
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 73.36 72.69
EES13132 Sorghum cytosol 64.95 63.47
GSMUA_Achr10P... Banana plasma membrane 50.47 51.18
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 41.12 50.0
EES16682 Sorghum golgi, plasma membrane, plastid 48.6 48.6
PGSC0003DMT400015090 Potato plasma membrane 47.2 48.56
Solyc06g074040.1.1 Tomato plasma membrane 46.73 48.08
GSMUA_Achr8P34450_001 Banana plasma membrane 45.33 46.41
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 38.78 46.37
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 45.33 45.97
PGSC0003DMT400050538 Potato plasma membrane 43.93 44.98
Solyc11g068890.1.1 Tomato plasma membrane 43.46 44.5
Bra035001.1-P Field mustard plasma membrane 42.52 44.17
CDY69513 Canola plasma membrane 42.52 44.17
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 43.93 44.13
CDY08687 Canola plasma membrane 42.06 43.69
AT3G44220.1 Thale cress plasma membrane 41.59 43.2
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 42.06 42.86
KRG96252 Soybean plasma membrane 42.06 42.86
EES08013 Sorghum golgi, plasma membrane, plastid 42.52 42.52
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 41.12 42.51
KRH72197 Soybean plasma membrane 41.12 42.51
KRH26671 Soybean plasma membrane 43.46 42.08
CDY29084 Canola mitochondrion 32.71 40.7
KRH32836 Soybean plasma membrane 39.72 40.67
AT5G06330.1 Thale cress plasma membrane 39.25 40.58
CDX90600 Canola plasma membrane 39.25 40.38
CDY72430 Canola cytosol 39.25 40.38
Bra033428.1-P Field mustard cytosol 39.25 40.38
Bra012801.1-P Field mustard plasma membrane 39.25 40.38
AT3G11660.1 Thale cress plasma membrane 39.25 40.19
Bra038671.1-P Field mustard plasma membrane 39.25 39.81
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 39.72 39.72
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 39.25 39.62
Bra034822.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid 39.25 39.62
AT2G35960.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 38.78 39.52
Bra006927.1-P Field mustard cytosol 38.32 39.42
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 38.78 39.34
PGSC0003DMT400042351 Potato extracellular, plasma membrane 38.78 39.34
CDY01043 Canola mitochondrion 38.78 39.15
KRH22643 Soybean plasma membrane 39.72 38.99
AT3G52470.1 Thale cress extracellular, plasma membrane 37.85 38.94
CDY69198 Canola cytosol 37.85 38.94
CDY68967 Canola cytosol 37.85 38.94
VIT_06s0080g01200.t01 Wine grape plasma membrane 37.85 38.94
Bra002396.1-P Field mustard plasma membrane 37.38 38.65
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 38.32 38.5
CDY32068 Canola plasma membrane 36.92 38.35
EES06921 Sorghum endoplasmic reticulum 37.85 38.21
CDX92375 Canola plasma membrane 36.92 38.16
EES12138 Sorghum extracellular, golgi, plasma membrane 39.25 38.01
PGSC0003DMT400072342 Potato extracellular, plasma membrane 37.38 37.91
CDX98590 Canola plasma membrane 36.45 37.68
CDY55755 Canola plasma membrane 36.92 37.09
CDY40419 Canola plasma membrane 35.98 37.02
Bra017276.1-P Field mustard plasma membrane 35.98 37.02
Bra005892.1-P Field mustard plasma membrane 36.45 36.62
AT2G35970.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 35.51 36.02
AT4G09590.1 Thale cress cytosol, plasma membrane, vacuole 35.51 36.02
CDY35671 Canola plasma membrane 35.05 35.89
CDY09123 Canola plasma membrane 35.05 35.89
Bra020177.1-P Field mustard plasma membrane 34.58 35.41
CDX81001 Canola plastid 35.51 35.35
KRH67997 Soybean plastid 41.59 35.32
AT5G05657.1 Thale cress plastid 21.5 33.58
CDX95339 Canola plasma membrane 38.32 27.52
OQU84133 Sorghum endoplasmic reticulum, golgi, nucleus 26.64 24.57
EER99240 Sorghum golgi 24.3 23.74
OQU77870 Sorghum plastid 28.5 19.12
Protein Annotations
MapMan:35.1EntrezGene:8067058UniProt:C5YLD7EnsemblPlants:EES14353ProteinID:EES14353ProteinID:EES14353.1
GO:GO:0003674GO:GO:0004871GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006950
GO:GO:0006952GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009506GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0046658InterPro:LEA_2PFAM:PF03168PANTHER:PTHR31415
PANTHER:PTHR31415:SF7EnsemblPlantsGene:SORBI_3007G001900unigene:Sbi.14089TMHMM:TMhelixUniParc:UPI0001A87882RefSeq:XP_002444858.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr7:-:154796..156742
Molecular Weight (calculated)
23919.1 Da
IEP (calculated)
8.955
GRAVY (calculated)
0.229
Length
214 amino acids
Sequence
(BLAST)
001: MSIKYCDQHK DCERQRLYRR FCAALVGIIL LLLLIVLIVW LVLRPTKPRF FLNDVSIVCI NVSSASYLTV TMQATLASRN TNDRVGIYYD RADVYAEYRA
101: MQITVPTSLP PFFQPPNDAT VWAPFLSASN VPLPAYLATA LTQDETAGYL LVTIRVDGWI RWKAGAFITS HYHLRVRCPA LLTVNDGQGS YGSNAGGGLG
201: YFKFQRAAPC IVDV
Best Arabidopsis Sequence Match ( AT3G44220.1 )
(BLAST)
001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV
Arabidopsis Description
At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.