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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • cytosol 2
  • golgi 2
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:extracellular, golgi, plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69198 Canola cytosol 99.52 99.52
CDY68967 Canola cytosol 99.04 99.04
Bra012801.1-P Field mustard plasma membrane 95.67 95.67
Bra033428.1-P Field mustard cytosol 93.75 93.75
AT3G52470.1 Thale cress extracellular, plasma membrane 87.5 87.5
Bra017276.1-P Field mustard plasma membrane 74.04 74.04
Bra038671.1-P Field mustard plasma membrane 69.71 68.72
Bra034822.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid 67.79 66.51
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.77 56.04
KRH72197 Soybean plasma membrane 55.77 56.04
KRH32836 Soybean plasma membrane 56.25 55.98
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 56.73 55.92
Bra035001.1-P Field mustard plasma membrane 54.33 54.85
KRG96252 Soybean plasma membrane 55.29 54.76
PGSC0003DMT400042351 Potato extracellular, plasma membrane 54.33 53.55
PGSC0003DMT400072342 Potato extracellular, plasma membrane 53.85 53.08
Bra005892.1-P Field mustard plasma membrane 50.48 49.3
Bra002396.1-P Field mustard plasma membrane 47.12 47.34
GSMUA_Achr9P08960_001 Banana plasma membrane 47.12 46.67
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 46.63 46.63
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 46.63 46.63
GSMUA_Achr10P... Banana plasma membrane 47.12 46.45
Os11t0157200-03 Rice plasma membrane 46.63 46.19
KRH67997 Soybean plastid 54.81 45.24
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 37.98 45.14
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 46.15 45.07
Zm00001d052776_P001 Maize extracellular 46.15 45.07
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 46.15 45.07
Bra020177.1-P Field mustard plasma membrane 45.19 44.98
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 38.46 44.69
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 45.67 44.6
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 45.67 44.6
GSMUA_Achr8P34450_001 Banana plasma membrane 44.71 44.5
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 45.67 44.39
EES16682 Sorghum golgi, plasma membrane, plastid 45.67 44.39
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 44.23 44.23
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 44.71 44.08
Os12t0159600-01 Rice plastid 44.23 43.4
Zm00001d023468_P001 Maize extracellular 44.23 43.19
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 43.75 42.92
TraesCS5D01G133300.1 Wheat cytosol 42.79 42.79
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 43.75 42.72
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 36.06 42.61
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 43.27 41.67
HORVU7Hr1G078320.1 Barley cytosol 43.27 41.67
EES08013 Sorghum golgi, plasma membrane, plastid 42.79 41.59
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 42.79 41.2
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 42.79 41.2
Zm00001d016733_P001 Maize extracellular, plasma membrane 36.06 39.89
EES13132 Sorghum cytosol 41.83 39.73
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 40.87 39.72
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 18.27 39.58
Os04t0685400-01 Rice golgi, plasma membrane, plastid 41.83 39.55
Zm00001d026664_P001 Maize extracellular 41.83 39.37
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 39.42 38.32
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 39.42 38.14
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 39.42 38.14
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 39.42 38.14
EES06921 Sorghum endoplasmic reticulum 38.46 37.74
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 40.38 37.67
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 39.9 37.56
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 39.42 37.1
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 39.42 37.1
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.98 36.92
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.98 36.92
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.98 36.92
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 37.98 36.57
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 39.9 36.56
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 37.5 36.11
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 37.5 36.11
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 37.5 36.11
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 38.94 36.0
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 37.98 35.91
HORVU5Hr1G040160.3 Barley golgi, peroxisome 47.12 35.9
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 37.02 35.65
EES12138 Sorghum extracellular, golgi, plasma membrane 37.5 35.29
Os04t0416700-01 Rice golgi, plasma membrane 37.02 35.0
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 37.5 34.82
HORVU2Hr1G040910.1 Barley peroxisome 39.42 34.45
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 36.54 33.93
Bra003039.1-P Field mustard plastid 34.62 33.8
Bra022668.1-P Field mustard endoplasmic reticulum, nucleus, plasma membrane 34.13 33.33
Bra037412.1-P Field mustard cytosol, peroxisome, plasma membrane 26.92 24.24
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 22.6 23.62
Bra000927.1-P Field mustard cytosol, peroxisome, plasma membrane 25.96 23.58
Protein Annotations
EnsemblPlants:Bra006927.1EnsemblPlants:Bra006927.1-PEnsemblPlantsGene:Bra006927GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:LEA_2PANTHER:PTHR31415PANTHER:PTHR31415:SF2PFAM:PF03168SEG:segTMHMM:TMhelix
UniParc:UPI0002542E33UniProt:M4CRT5MapMan:35.1:::
Description
AT3G52470 (E=2e-094) | harpin-induced family protein / HIN1 family protein / harpin-responsive family protein
Coordinates
chrA09:+:26249743..26250369
Molecular Weight (calculated)
23089.3 Da
IEP (calculated)
10.345
GRAVY (calculated)
0.139
Length
208 amino acids
Sequence
(BLAST)
001: MSKDCGNHGG GKEAAVRRIL AAVIAFIIIV LITIFLVWAI LRPTKPRFVL QDATVFAFNL SQPHLLTTNF QITFASRNPN SKIGIYYDRL HVYATYRNQQ
101: ITLRTAIPPT YQGHKEDNIW SPFVYGTAVP IAPYNSVALG EEQGRGFVGL MIRADGRVRW KVGTLITGKY HIHVRCPAYI NLGNKAAGVI VGDNAVKYTL
201: VTKCTVNV
Best Arabidopsis Sequence Match ( AT3G52470.1 )
(BLAST)
001: MSKDCGNHGG GKEVVVRKLC AAIIAFIVIV LITIFLVWVI LRPTKPRFVL QDATVYAFNL SQPNLLTSNF QVTIASRNPN SKIGIYYDRL HVYATYMNQQ
101: ITLRTAIPPT YQGHKEVNVW SPFVYGTAVP IAPYNSVALG EEKDRGFVGL MIRADGTVRW KVRTLITGKY HIHVRCQAFI NLGNKAAGVL VGDNAVKYTL
201: ANKCSVNV
Arabidopsis Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:UniProtKB/TrEMBL;Acc:Q9SVC8]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.