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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • endoplasmic reticulum 2
  • plastid 1
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 79.46 83.18
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 79.46 83.18
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 79.02 82.33
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 79.02 82.33
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 78.57 82.24
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 79.02 81.94
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 78.57 81.86
Zm00001d016733_P001 Maize extracellular, plasma membrane 66.07 78.72
EES06921 Sorghum endoplasmic reticulum 74.11 78.3
HORVU2Hr1G040910.1 Barley peroxisome 81.25 76.47
Os04t0416700-01 Rice golgi, plasma membrane 64.73 65.91
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 25.45 59.38
Os12t0159600-01 Rice plastid 51.79 54.72
Os11t0157200-03 Rice plasma membrane 49.55 52.86
GSMUA_Achr9P08960_001 Banana plasma membrane 45.09 48.1
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 41.07 42.99
Solyc06g074040.1.1 Tomato plasma membrane 39.73 42.79
PGSC0003DMT400015090 Potato plasma membrane 39.73 42.79
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 40.62 42.72
AT3G44220.1 Thale cress plasma membrane 39.29 42.72
Bra002396.1-P Field mustard plasma membrane 39.29 42.51
CDX92375 Canola plasma membrane 39.29 42.51
VIT_06s0080g01200.t01 Wine grape plasma membrane 39.29 42.31
Os04t0685400-01 Rice golgi, plasma membrane, plastid 41.52 42.27
CDY69513 Canola plasma membrane 38.84 42.23
CDY08687 Canola plasma membrane 38.84 42.23
Bra035001.1-P Field mustard plasma membrane 38.84 42.23
CDX98590 Canola plasma membrane 38.84 42.03
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 38.84 41.43
KRH26671 Soybean plasma membrane 40.18 40.72
CDY29084 Canola mitochondrion 31.25 40.7
KRH32836 Soybean plasma membrane 37.5 40.19
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 37.05 40.1
AT3G11660.1 Thale cress plasma membrane 37.05 39.71
KRH72197 Soybean plasma membrane 36.61 39.61
Bra038671.1-P Field mustard plasma membrane 36.61 38.86
AT5G06330.1 Thale cress plasma membrane 35.71 38.65
KRG96252 Soybean plasma membrane 36.16 38.57
Solyc11g068890.1.1 Tomato plasma membrane 35.71 38.28
PGSC0003DMT400050538 Potato plasma membrane 35.71 38.28
CDY01043 Canola mitochondrion 36.16 38.21
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 36.16 38.21
KRH22643 Soybean plasma membrane 37.05 38.07
CDX90600 Canola plasma membrane 35.27 37.98
CDY09123 Canola plasma membrane 35.27 37.8
Bra034822.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid 35.71 37.74
Bra006927.1-P Field mustard cytosol 34.82 37.5
Bra012801.1-P Field mustard plasma membrane 34.82 37.5
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 37.95 37.44
CDY32068 Canola plasma membrane 34.38 37.38
Bra020177.1-P Field mustard plasma membrane 34.82 37.32
CDY72430 Canola cytosol 34.38 37.02
CDY69198 Canola cytosol 34.38 37.02
CDY68967 Canola cytosol 34.38 37.02
CDY35671 Canola plasma membrane 34.38 36.84
CDY40419 Canola plasma membrane 33.93 36.54
Bra017276.1-P Field mustard plasma membrane 33.93 36.54
Bra033428.1-P Field mustard cytosol 33.93 36.54
AT3G52470.1 Thale cress extracellular, plasma membrane 33.93 36.54
AT2G35960.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 33.48 35.71
PGSC0003DMT400072342 Potato extracellular, plasma membrane 33.04 35.07
AT2G35970.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 32.59 34.6
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 32.14 34.12
PGSC0003DMT400042351 Potato extracellular, plasma membrane 32.14 34.12
CDX81001 Canola plastid 32.59 33.95
Bra005892.1-P Field mustard plasma membrane 32.14 33.8
AT4G09590.1 Thale cress cytosol, plasma membrane, vacuole 31.7 33.65
KRH67997 Soybean plastid 37.5 33.33
CDY55755 Canola plasma membrane 31.25 32.86
AT5G05657.1 Thale cress plastid 18.3 29.93
Os09t0532200-00 Rice plastid 28.57 29.36
Os02t0100600-01 Rice endoplasmic reticulum, golgi, nucleus 25.89 27.1
Os05t0367900-01 Rice plastid 30.36 26.15
CDX95339 Canola plasma membrane 32.59 24.5
Protein Annotations
MapMan:35.1EntrezGene:4329582EMBL:AK060001EMBL:AK065946EMBL:AK104564EMBL:AK109400
EMBL:AK109402ProteinID:BAD27922.1ProteinID:BAD28833.1ProteinID:BAF08968.1ProteinID:BAS79086.1GO:GO:0003674
GO:GO:0004871GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006950GO:GO:0006952
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009506GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0046658InterPro:LEA_2EnsemblPlantsGene:Os02g0538700EnsemblPlants:Os02t0538700-01PFAM:PF03168
PANTHER:PTHR31415PANTHER:PTHR31415:SF15UniProt:Q6ER87TMHMM:TMhelixUniParc:UPI00003CE559RefSeq:XP_015623399.1
SEG:seg:::::
Description
Harpin-induced 1 domain containing protein. (Os02t0538700-01);Harpin-induced 1 domain containing protein. (Os02t0538700-02)
Coordinates
chr2:-:19954579..19955654
Molecular Weight (calculated)
23715.7 Da
IEP (calculated)
8.971
GRAVY (calculated)
0.219
Length
224 amino acids
Sequence
(BLAST)
001: MSKEKHHKRE HHLRRCCGGM AACILALVLV VGFIALVVYL ALRPSKPSFY LQDLQLRSVD LGDPSLSATA QVTLASRNPN DHVGVHYRRL DVFVTYRDEP
101: VTVPVSLPPT YQGHRDVTIW SPVLSGESVP VAGFVADALR QDVAAGYVAL QVKVDGRVKW KVGSWVSGSY HLFVSCPAML ASAGPGGVGP MPLGGASAAV
201: VNGTGAGAVA SLRFTQPTGC SVEV
Best Arabidopsis Sequence Match ( AT5G22200.1 )
(BLAST)
001: MTGRYCDQHN GYEERRMRMM MRRIAWACLG LIVAVAFVVF LVWAILHPHG PRFVLQDVTI NDFNVSQPNF LSSNLQVTVS SRNPNDKIGI FYDRLDIYVT
101: YRNQEVTLAR LLPSTYQGHL EVTVWSPFLI GSAVPVAPYL SSALNEDLFA GLVLLNIKID GWVRWKVGSW VSGSYRLHVN CPAFITVTGK LTGTGPAIKY
201: QLVQRCAVDV
Arabidopsis Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:UniProtKB/TrEMBL;Acc:Q9C568]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.