Factsheet for Os02t0100600-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, nucleus

Predictor Summary:

nucleus 3
endoplasmic reticulum 1
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G083970.1	Barley	endoplasmic reticulum, peroxisome, plasma membrane	53.74	56.37
TraesCS6A01G349800.1	Wheat	endoplasmic reticulum	53.27	55.88
TraesCS6B01G383000.1	Wheat	endoplasmic reticulum	53.27	55.88
TraesCS5D01G110800.1	Wheat	cytosol, endoplasmic reticulum, nucleus	49.53	51.46
HORVU5Hr1G026690.1	Barley	nucleus	49.53	50.96
TraesCS5B01G103800.1	Wheat	cytosol	50.0	50.95
TraesCS5A01G098600.1	Wheat	cytosol, endoplasmic reticulum, nucleus	49.53	50.48
TraesCS7D01G429800.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	46.73	49.51
TraesCS7A01G440300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	46.26	49.01
OQU84133	Sorghum	endoplasmic reticulum, golgi, nucleus	52.8	48.71
TraesCS7D01G429700.1	Wheat	endoplasmic reticulum	45.79	48.28
TraesCS6D01G332300.1	Wheat	plastid	53.27	44.71
GSMUA_Achr4P18020_001	Banana	cytosol, endoplasmic reticulum, golgi, plastid	32.24	32.86
GSMUA_Achr5P14440_001	Banana	cytosol, endoplasmic reticulum, plasma membrane, plastid	30.84	31.73
Os11t0157200-03	Rice	plasma membrane	29.44	30.0
VIT_16s0098g00890.t01	Wine grape	plasma membrane	29.44	30.0
Os12t0159600-01	Rice	plastid	28.97	29.25
KRH64295	Soybean	plasma membrane	27.57	28.1
PGSC0003DMT400001571	Potato	endoplasmic reticulum, nucleus, plasma membrane	27.57	27.7
Solyc03g081230.1.1	Tomato	endoplasmic reticulum, nucleus, plasma membrane	27.57	27.7
Os09t0532200-00	Rice	plastid	27.1	26.61
Os08t0102700-01	Rice	cytosol, peroxisome, plasma membrane	27.57	25.99
Os02t0538700-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	27.1	25.89
Bra003039.1-P	Field mustard	plastid	25.7	25.82
CDY14357	Canola	plastid	25.7	25.82
CDY51789	Canola	endoplasmic reticulum, nucleus, plasma membrane	25.23	25.35
CDY28821	Canola	endoplasmic reticulum, nucleus, plasma membrane	25.23	25.35
CDY20226	Canola	endoplasmic reticulum, nucleus, plasma membrane	25.23	25.35
Bra022668.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	25.23	25.35
AT5G53730.1	Thale cress	plastid	24.3	24.41
Os04t0685400-01	Rice	golgi, plasma membrane, plastid	24.3	23.64
KRH53632	Soybean	plasma membrane	23.83	22.87
Os04t0416700-01	Rice	golgi, plasma membrane	22.43	21.82
Os05t0367900-01	Rice	plastid	23.83	19.62

Protein Annotations

MapMan:35.2	EntrezGene:4327974	EMBL:AK062483	ProteinID:BAD08179.1	ProteinID:BAD38569.1	ProteinID:BAF07496.1
ProteinID:BAS76503.1	ProteinID:EAZ21382.1	GO:GO:0003674	GO:GO:0004871	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009506	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0046658	InterPro:LEA_2
EnsemblPlantsGene:Os02g0100600	EnsemblPlants:Os02t0100600-01	PFAM:PF03168	PANTHER:PTHR31415	PANTHER:PTHR31415:SF20	UniProt:Q6YU99
TMHMM:TMhelix	UniParc:UPI00002368D8	RefSeq:XP_015623887.1	SEG:seg	:	:

Description

Harpin-induced 1 domain containing protein. (Os02t0100600-01)

Coordinates

chr2:+:33032..33966

Molecular Weight (calculated)

22502.1 Da

IEP (calculated)

10.872

GRAVY (calculated)

0.142

Length

214 amino acids

Sequence
(BLAST)

001: MSLITDESPR DCSSYKHQHH HRAIHGRRIS RRTLVVASSA VVSLASLSLI LWLVLRPSPP RFSLLAATTT ANDSASVVAI NAAFAARNPN SHTAVLYDRL
101: QASASYAGLP LTAPSPLIPP FLPQQGQGDA MLSASLTSPP AAAAVAGGRA LLRLRVEGQL RWKVAAWVTG RHALTVDCIA VVELQPTPTP SPSAIVGVLQ
201: PQDQAGSRCS TTVA

Best Arabidopsis Sequence Match ( AT5G53730.1 )
(BLAST)

001: MSQISITSPK HCAKKGGINI NNRHKKLFFT FSTFFSGLLL IIFLVWLILH PERPEFSLTE ADIYSLNLTT SSTHLLNSSV QLTLFSKNPN KKVGIYYDKL
101: LVYAAYRGQQ ITSEASLPPF YQSHEEINLL TAFLQGTELP VAQSFGYQIS RERSTGKIII GMKMDGKLRW KIGTWVSGAY RFNVNCLAIV AFGMNMTTPP
201: LASLQGTRCS TTI

Arabidopsis Description

NHL26NHL26 [Source:UniProtKB/TrEMBL;Acc:A0A178UFX4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.