Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH53632 | Soybean | plasma membrane | 83.81 | 78.92 |
| VIT_16s0098g00890.t01 | Wine grape | plasma membrane | 74.29 | 74.29 |
| Solyc03g081230.1.1 | Tomato | endoplasmic reticulum, nucleus, plasma membrane | 65.71 | 64.79 |
| PGSC0003DMT400001571 | Potato | endoplasmic reticulum, nucleus, plasma membrane | 64.29 | 63.38 |
| Bra022668.1-P | Field mustard | endoplasmic reticulum, nucleus, plasma membrane | 62.38 | 61.5 |
| CDY28821 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 62.38 | 61.5 |
| CDY51789 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 62.38 | 61.5 |
| CDY20226 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 61.9 | 61.03 |
| Bra003039.1-P | Field mustard | plastid | 61.43 | 60.56 |
| CDY14357 | Canola | plastid | 61.43 | 60.56 |
| AT5G53730.1 | Thale cress | plastid | 60.48 | 59.62 |
| GSMUA_Achr5P14440_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane, plastid | 54.29 | 54.81 |
| GSMUA_Achr4P18020_001 | Banana | cytosol, endoplasmic reticulum, golgi, plastid | 53.33 | 53.33 |
| KRH72197 | Soybean | plasma membrane | 38.57 | 39.13 |
| KRG96252 | Soybean | plasma membrane | 39.05 | 39.05 |
| KRH25304 | Soybean | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 39.52 | 38.97 |
| KRH30370 | Soybean | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 39.52 | 38.78 |
| KRH32836 | Soybean | plasma membrane | 37.62 | 37.8 |
| KRH26671 | Soybean | plasma membrane | 35.71 | 33.94 |
| KRH67997 | Soybean | plastid | 39.52 | 32.94 |
| KRH22643 | Soybean | plasma membrane | 33.81 | 32.57 |
| HORVU6Hr1G083970.1 | Barley | endoplasmic reticulum, peroxisome, plasma membrane | 27.62 | 28.43 |
| TraesCS6B01G383000.1 | Wheat | endoplasmic reticulum | 27.62 | 28.43 |
| TraesCS6A01G349800.1 | Wheat | endoplasmic reticulum | 27.62 | 28.43 |
| KRG97253 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 26.67 | 28.43 |
| Os02t0100600-01 | Rice | endoplasmic reticulum, golgi, nucleus | 28.1 | 27.57 |
| KRH68967 | Soybean | extracellular, plasma membrane | 25.24 | 26.9 |
| TraesCS5A01G098600.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 26.67 | 26.67 |
| TraesCS5B01G103800.1 | Wheat | cytosol | 26.67 | 26.67 |
| HORVU5Hr1G026690.1 | Barley | nucleus | 26.19 | 26.44 |
| TraesCS5D01G110800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 25.71 | 26.21 |
| TraesCS7D01G429700.1 | Wheat | endoplasmic reticulum | 24.29 | 25.12 |
| TraesCS7D01G429800.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane, plastid | 23.81 | 24.75 |
| OQU84133 | Sorghum | endoplasmic reticulum, golgi, nucleus | 26.67 | 24.14 |
| TraesCS7A01G440300.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 22.86 | 23.76 |
| TraesCS6D01G332300.1 | Wheat | plastid | 28.57 | 23.53 |
| KRH06353 | Soybean | cytosol | 23.81 | 20.24 |
| KRH47782 | Soybean | cytosol | 22.86 | 19.28 |
Protein Annotations
| EntrezGene:100783857 | MapMan:35.1 | EMBL:ACUP02002752 | EnsemblPlantsGene:GLYMA_04G228200 | GO:GO:0003674 | GO:GO:0004871 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0046658 | UniProt:I1JYH8 | EnsemblPlants:KRH64295 | ProteinID:KRH64295 | ProteinID:KRH64295.1 | InterPro:LEA_2 |
| PFAM:PF03168 | PANTHER:PTHR31415 | PANTHER:PTHR31415:SF20 | TMHMM:TMhelix | UniParc:UPI0002339C55 | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:-:49752983..49754236
Molecular Weight (calculated)
23256.4 Da
IEP (calculated)
10.137
GRAVY (calculated)
-0.027
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKITITSPK HCAGKEGLRI KKNYKKIYFT FSAFFTTILL LILLIWLILH PAKPQFSLKE VDIYQLNLSG PNLNSSIQLT LLSKNPNQKV GIYYDEIQFY
101: ATYKGQQITG DTPVPPFYQG QEESNLITAS LVGNALPVAP SLGYELGRDQ IVGRLVLNLK ANGKLRWKVG TWVSGRYRFN VNCVAINAFG PSIPAGPLTS
201: KQGAQCSTTL
101: ATYKGQQITG DTPVPPFYQG QEESNLITAS LVGNALPVAP SLGYELGRDQ IVGRLVLNLK ANGKLRWKVG TWVSGRYRFN VNCVAINAFG PSIPAGPLTS
201: KQGAQCSTTL
001: MSQISITSPK HCAKKGGINI NNRHKKLFFT FSTFFSGLLL IIFLVWLILH PERPEFSLTE ADIYSLNLTT SSTHLLNSSV QLTLFSKNPN KKVGIYYDKL
101: LVYAAYRGQQ ITSEASLPPF YQSHEEINLL TAFLQGTELP VAQSFGYQIS RERSTGKIII GMKMDGKLRW KIGTWVSGAY RFNVNCLAIV AFGMNMTTPP
201: LASLQGTRCS TTI
101: LVYAAYRGQQ ITSEASLPPF YQSHEEINLL TAFLQGTELP VAQSFGYQIS RERSTGKIII GMKMDGKLRW KIGTWVSGAY RFNVNCLAIV AFGMNMTTPP
201: LASLQGTRCS TTI
Arabidopsis Description
NHL26NHL26 [Source:UniProtKB/TrEMBL;Acc:A0A178UFX4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.