Factsheet for TraesCS7D01G429800.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, cytosol, plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 1
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G429700.1	Wheat	endoplasmic reticulum	92.08	91.63
TraesCS7A01G440300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	89.6	89.6
TraesCS5D01G110800.1	Wheat	cytosol, endoplasmic reticulum, nucleus	69.8	68.45
TraesCS6D01G332300.1	Wheat	plastid	67.82	53.73
Os02t0100600-01	Rice	endoplasmic reticulum, golgi, nucleus	49.51	46.73
OQU84133	Sorghum	endoplasmic reticulum, golgi, nucleus	51.98	45.26
GSMUA_Achr5P14440_001	Banana	cytosol, endoplasmic reticulum, plasma membrane, plastid	27.72	26.92
PGSC0003DMT400001571	Potato	endoplasmic reticulum, nucleus, plasma membrane	28.22	26.76
Solyc03g081230.1.1	Tomato	endoplasmic reticulum, nucleus, plasma membrane	28.22	26.76
GSMUA_Achr4P18020_001	Banana	cytosol, endoplasmic reticulum, golgi, plastid	27.23	26.19
TraesCS7D01G323900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	27.72	25.93
VIT_16s0098g00890.t01	Wine grape	plasma membrane	26.73	25.71
TraesCS5D01G133300.1	Wheat	cytosol	26.24	25.48
TraesCS5D01G133400.1	Wheat	golgi, plasma membrane, plastid	25.74	25.0
TraesCS2D01G596200.1	Wheat	cytosol, golgi, plasma membrane	26.73	24.43
AT5G53730.1	Thale cress	plastid	25.74	24.41
TraesCS4D01G113300.1	Wheat	peroxisome, plasma membrane, plastid	25.74	24.41
KRH64295	Soybean	plasma membrane	24.75	23.81
Bra003039.1-P	Field mustard	plastid	24.75	23.47
CDY20226	Canola	endoplasmic reticulum, nucleus, plasma membrane	24.75	23.47
CDY14357	Canola	plastid	24.75	23.47
CDY51789	Canola	endoplasmic reticulum, nucleus, plasma membrane	23.27	22.07
CDY28821	Canola	endoplasmic reticulum, nucleus, plasma membrane	23.27	22.07
Bra022668.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	23.27	22.07
TraesCS5D01G498400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	23.27	21.96
KRH53632	Soybean	plasma membrane	23.27	21.08
TraesCS5D01G326100.1	Wheat	cytosol, plasma membrane, vacuole	22.28	20.09
TraesCS2D01G210700.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	20.79	19.53
TraesCS2D01G295700.1	Wheat	extracellular, plasma membrane	19.31	18.06
TraesCS1D01G233500.1	Wheat	peroxisome	23.76	17.45

Protein Annotations

EnsemblPlants:TraesCS7D01G429800.1	EnsemblPlantsGene:TraesCS7D01G429800	PANTHER:PTHR31415	PANTHER:PTHR31415:SF20	SEG:seg	TMHMM:TMhelix
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:549368240..549369041

Molecular Weight (calculated)

21344.0 Da

IEP (calculated)

11.131

GRAVY (calculated)

0.245

Length

202 amino acids

Sequence
(BLAST)

001: MSLITDDPDR APRDCTAARR HQSGRRRRRL LIVAASAVAL LLALAIILWL TLRPSSPRFR LLTATASTNA TGGMGTVLLV ASLVAHNPNA HALALYDGLR
101: ARASYAGLQL AAAAPIPPFQ QAQGDVKLSA TLLSSSAAEE TMAGERSPAL LTLRLEGRLR WKVAVWVSGS RTLAAECVAA AVSPSQLRAV VVQDCQCATT
201: IE

Best Arabidopsis Sequence Match ( AT5G53730.1 )
(BLAST)

001: MSQISITSPK HCAKKGGINI NNRHKKLFFT FSTFFSGLLL IIFLVWLILH PERPEFSLTE ADIYSLNLTT SSTHLLNSSV QLTLFSKNPN KKVGIYYDKL
101: LVYAAYRGQQ ITSEASLPPF YQSHEEINLL TAFLQGTELP VAQSFGYQIS RERSTGKIII GMKMDGKLRW KIGTWVSGAY RFNVNCLAIV AFGMNMTTPP
201: LASLQGTRCS TTI

Arabidopsis Description

NHL26NHL26 [Source:UniProtKB/TrEMBL;Acc:A0A178UFX4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.