Factsheet for TraesCS2D01G596200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, golgi

Predictor Summary:

golgi 1
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, golgi, plasma membrane
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G603000.1	Wheat	cytosol, golgi, plasma membrane	97.74	97.74
TraesCS2A01G583600.1	Wheat	cytosol, golgi, plasma membrane	97.74	97.74
HORVU2Hr1G123370.1	Barley	cytosol, golgi, plasma membrane	96.83	97.27
EES13132	Sorghum	cytosol	84.16	84.93
Zm00001d026664_P001	Maize	extracellular	83.26	83.26
Os04t0685400-01	Rice	golgi, plasma membrane, plastid	79.19	79.55
TraesCS7D01G323900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	62.9	64.35
GSMUA_Achr9P29670_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	44.34	55.68
GSMUA_Achr10P...	Banana	plasma membrane	50.23	52.61
GSMUA_Achr8P34450_001	Banana	plasma membrane	49.32	52.15
TraesCS5D01G133400.1	Wheat	golgi, plasma membrane, plastid	48.87	51.92
TraesCS4D01G113300.1	Wheat	peroxisome, plasma membrane, plastid	49.32	51.17
GSMUA_Achr6P19500_001	Banana	endoplasmic reticulum, plasma membrane	48.42	50.71
TraesCS5D01G133300.1	Wheat	cytosol	47.06	50.0
GSMUA_Achr11P...	Banana	cytosol, extracellular, mitochondrion, peroxisome	40.27	49.72
PGSC0003DMT400015090	Potato	plasma membrane	46.15	49.04
Solyc06g074040.1.1	Tomato	plasma membrane	45.7	48.56
VIT_06s0080g01200.t01	Wine grape	plasma membrane	45.25	48.08
GSMUA_Achr7P03290_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	45.7	47.42
PGSC0003DMT400050538	Potato	plasma membrane	44.34	46.89
Solyc11g068890.1.1	Tomato	plasma membrane	44.34	46.89
TraesCS5D01G498400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	44.34	45.79
KRH26671	Soybean	plasma membrane	45.7	45.7
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	43.89	45.33
Bra035001.1-P	Field mustard	plasma membrane	41.63	44.66
CDY69513	Canola	plasma membrane	41.63	44.66
CDY08687	Canola	plasma membrane	41.63	44.66
TraesCS2D01G210700.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	42.99	44.19
AT3G44220.1	Thale cress	plasma membrane	41.18	44.17
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	42.08	43.66
TraesCS2D01G295700.1	Wheat	extracellular, plasma membrane	41.63	42.59
Bra002396.1-P	Field mustard	plasma membrane	39.37	42.03
KRH22643	Soybean	plasma membrane	41.18	41.74
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	38.91	41.55
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	39.37	41.43
CDY29084	Canola	mitochondrion	32.13	41.28
AT3G11660.1	Thale cress	plasma membrane	38.91	41.15
AT5G06330.1	Thale cress	plasma membrane	38.46	41.06
CDX92375	Canola	plasma membrane	38.46	41.06
CDY72430	Canola	cytosol	38.46	40.87
CDX90600	Canola	plasma membrane	38.46	40.87
Bra012801.1-P	Field mustard	plasma membrane	38.46	40.87
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	38.91	40.76
Bra038671.1-P	Field mustard	plasma membrane	38.91	40.76
KRH32836	Soybean	plasma membrane	38.46	40.67
KRH72197	Soybean	plasma membrane	38.01	40.58
CDX98590	Canola	plasma membrane	38.01	40.58
AT3G52470.1	Thale cress	extracellular, plasma membrane	38.01	40.38
Bra033428.1-P	Field mustard	cytosol	38.01	40.38
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	38.46	40.28
Bra034822.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid	38.46	40.09
CDY01043	Canola	mitochondrion	38.46	40.09
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	38.46	40.09
AT2G35960.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	38.01	40.0
Bra006927.1-P	Field mustard	cytosol	37.56	39.9
CDY69198	Canola	cytosol	37.56	39.9
CDY68967	Canola	cytosol	37.56	39.9
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	38.01	39.81
CDY32068	Canola	plasma membrane	37.1	39.81
KRG96252	Soybean	plasma membrane	37.56	39.52
CDY35671	Canola	plasma membrane	36.65	38.76
Bra017276.1-P	Field mustard	plasma membrane	36.2	38.46
CDY40419	Canola	plasma membrane	36.2	38.46
AT2G35970.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	35.75	37.44
AT4G09590.1	Thale cress	cytosol, plasma membrane, vacuole	35.75	37.44
CDY09123	Canola	plasma membrane	35.29	37.32
Bra020177.1-P	Field mustard	plasma membrane	34.84	36.84
CDY55755	Canola	plasma membrane	34.39	35.68
Bra005892.1-P	Field mustard	plasma membrane	33.94	35.21
KRH67997	Soybean	plastid	39.37	34.52
CDX81001	Canola	plastid	33.48	34.42
AT5G05657.1	Thale cress	plastid	21.27	34.31
TraesCS5D01G326100.1	Wheat	cytosol, plasma membrane, vacuole	29.86	29.46
CDX95339	Canola	plasma membrane	37.56	27.85
TraesCS7D01G429700.1	Wheat	endoplasmic reticulum	24.89	27.09
TraesCS7D01G429800.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	24.43	26.73
TraesCS5D01G110800.1	Wheat	cytosol, endoplasmic reticulum, nucleus	24.43	26.21
TraesCS1D01G233500.1	Wheat	peroxisome	30.77	24.73
TraesCS6D01G332300.1	Wheat	plastid	25.79	22.35

Protein Annotations

EnsemblPlants:TraesCS2D01G596200.1	EnsemblPlantsGene:TraesCS2D01G596200	InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF8	PFAM:PF03168
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2D:+:649338237..649339336

Molecular Weight (calculated)

24381.7 Da

IEP (calculated)

8.855

GRAVY (calculated)

0.084

Length

221 amino acids

Sequence
(BLAST)

001: MAVKDCGGHK GGGCECHRRR LYRKCCGALL ALVLLALFII LIVYLVLRPH KPRFYLQDLA VLCLNVTPPT SAYLFTTMQA TVAARNPNDR VGVYYDEADM
101: YAQYKGVAIT VPTRLPVAYQ GHRDQSVWSP YLRSMDSVVL PPQLAVALAQ DETAGYVLVD VRVDGQVRWK VGTWISGHYH LRVNCPALIR VNEGKGSYGA
201: TTGGGPDYFR FQQAAACAVD V

Best Arabidopsis Sequence Match ( AT3G11660.1 )
(BLAST)

001: MKDCENHGHS RRKLIRRIFW SIIFVLFIIF LTILLIWAIL QPSKPRFILQ DATVYAFNVS GNPPNLLTSN FQITLSSRNP NNKIGIYYDR LDVYATYRSQ
101: QITFPTSIPP TYQGHKDVDI WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY INFGNKANGV IVGDNAVKYT
201: FTTSCSVSV

Arabidopsis Description

NHL1NDR1/HIN1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRN0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.