CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90600	Canola	plasma membrane	95.35	78.85
CDY69198	Canola	cytosol	91.28	75.48
CDY68967	Canola	cytosol	91.28	75.48
CDY72430	Canola	cytosol	91.28	75.48
AT3G52470.1	Thale cress	extracellular, plasma membrane	86.63	71.63
CDY32068	Canola	plasma membrane	75.0	62.62
CDY40419	Canola	plasma membrane	73.84	61.06
CDY01043	Canola	mitochondrion	69.19	56.13
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	69.19	56.13
CDX95339	Canola	plasma membrane	87.79	50.67
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	58.14	48.31
KRH72197	Soybean	plasma membrane	57.56	47.83
KRH32836	Soybean	plasma membrane	57.56	47.37
CDY69513	Canola	plasma membrane	56.4	47.09
CDY08687	Canola	plasma membrane	56.4	47.09
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	57.56	46.92
KRG96252	Soybean	plasma membrane	55.23	45.24
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	55.23	45.02
CDY55755	Canola	plasma membrane	52.33	42.25
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	51.74	42.18
TraesCS5B01G125000.1	Wheat	cytosol, extracellular, plasma membrane	41.86	41.14
GSMUA_Achr11P...	Banana	cytosol, extracellular, mitochondrion, peroxisome	42.44	40.78
CDX81001	Canola	plastid	50.0	40.0
TraesCS5A01G125800.1	Wheat	golgi, plasma membrane, plastid	48.26	39.9
TraesCS5D01G133400.1	Wheat	golgi, plasma membrane, plastid	48.26	39.9
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	22.09	39.58
GSMUA_Achr9P08960_001	Banana	plasma membrane	48.26	39.52
Zm00001d052776_P001	Maize	extracellular	48.84	39.44
TraesCS4B01G115700.1	Wheat	peroxisome, plasma membrane, plastid	48.84	39.44
EES16682	Sorghum	golgi, plasma membrane, plastid	48.84	39.25
GSMUA_Achr9P29670_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	40.12	39.2
CDX98590	Canola	plasma membrane	47.09	39.13
CDX92375	Canola	plasma membrane	47.09	39.13
Os11t0157200-03	Rice	plasma membrane	47.67	39.05
TraesCS4D01G113300.1	Wheat	peroxisome, plasma membrane, plastid	48.26	38.97
HORVU4Hr1G021190.1	Barley	golgi, plasma membrane, plastid	48.26	38.97
CDY35671	Canola	plasma membrane	47.09	38.76
TraesCS4A01G199700.1	Wheat	golgi, plasma membrane, plastid	47.67	38.5
GSMUA_Achr10P...	Banana	plasma membrane	47.09	38.39
EES08013	Sorghum	golgi, plasma membrane, plastid	47.67	38.32
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	47.67	38.32
Zm00001d023468_P001	Maize	extracellular	47.09	38.03
TraesCS5D01G133300.1	Wheat	cytosol	45.93	37.98
TraesCS5B01G124900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	45.93	37.98
CDY09123	Canola	plasma membrane	45.93	37.8
GSMUA_Achr8P34450_001	Banana	plasma membrane	45.93	37.8
GSMUA_Achr6P19500_001	Banana	endoplasmic reticulum, plasma membrane	45.93	37.44
KRH67997	Soybean	plastid	54.65	37.3
Os12t0159600-01	Rice	plastid	45.93	37.26
Zm00001d041927_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	45.93	37.26
Zm00001d016733_P001	Maize	extracellular, plasma membrane	40.12	36.7
GSMUA_Achr7P03290_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	45.35	36.62
EES06921	Sorghum	endoplasmic reticulum	43.6	35.38
TraesCS7D01G323900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	44.19	35.19
TraesCS7A01G327200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	44.19	35.19
TraesCS7B01G227800.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	44.19	35.19
HORVU7Hr1G078320.1	Barley	cytosol	43.6	34.72
Zm00001d034977_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	41.86	33.64
TraesCS2A01G297700.1	Wheat	extracellular, plasma membrane	41.86	33.33
HORVU2Hr1G073830.1	Barley	extracellular, plasma membrane	41.86	33.33
Os04t0685400-01	Rice	golgi, plasma membrane, plastid	42.44	33.18
TraesCS2A01G205300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	41.28	33.02
TraesCS2B01G232700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	41.28	33.02
TraesCS2D01G210700.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	41.28	33.02
Zm00001d003751_P001	Maize	extracellular, golgi, plasma membrane	43.02	32.89
TraesCS2D01G295700.1	Wheat	extracellular, plasma membrane	41.28	32.87
TraesCS2B01G313900.1	Wheat	extracellular, plasma membrane	41.28	32.87
Os04t0416700-01	Rice	golgi, plasma membrane	41.86	32.73
EES14353	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	40.7	32.71
TraesCS5B01G498200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	40.12	32.24
TraesCS5D01G498400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	40.12	32.24
TraesCS5A01G484900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	40.12	32.24
TraesCS2D01G596200.1	Wheat	cytosol, golgi, plasma membrane	41.28	32.13
EES12138	Sorghum	extracellular, golgi, plasma membrane	41.28	32.13
TraesCS5A01G125600.1	Wheat	cytosol, peroxisome, plasma membrane	41.28	31.84
TraesCS2B01G603000.1	Wheat	cytosol, golgi, plasma membrane	40.7	31.67
Os02t0538700-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	40.7	31.25
Zm00001d025371_P001	Maize	extracellular, golgi, plasma membrane	40.7	31.25
TraesCS2A01G583600.1	Wheat	cytosol, golgi, plasma membrane	40.12	31.22
Zm00001d026664_P001	Maize	extracellular	40.12	31.22
EES13132	Sorghum	cytosol	39.53	31.05
HORVU5Hr1G114220.1	Barley	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	38.95	31.02
HORVU5Hr1G040160.3	Barley	golgi, peroxisome	48.84	30.77
HORVU2Hr1G123370.1	Barley	cytosol, golgi, plasma membrane	38.95	30.45
Os08t0102700-01	Rice	cytosol, peroxisome, plasma membrane	39.53	29.96
HORVU2Hr1G040910.1	Barley	peroxisome	41.28	29.83
CDY14357	Canola	plastid	35.47	28.64
CDY51789	Canola	endoplasmic reticulum, nucleus, plasma membrane	34.3	27.7
CDY28821	Canola	endoplasmic reticulum, nucleus, plasma membrane	34.3	27.7
CDY20226	Canola	endoplasmic reticulum, nucleus, plasma membrane	34.3	27.7
HORVU2Hr1G066420.1	Barley	mitochondrion, plastid	27.33	23.62
CDX91852	Canola	cytosol, peroxisome, plasma membrane	27.91	20.96
CDY51712	Canola	cytosol, peroxisome, plasma membrane	27.91	20.78
CDY07145	Canola	cytosol, peroxisome, plasma membrane	27.91	20.69
CDX74380	Canola	cytosol, peroxisome, plasma membrane	27.33	20.52

Protein Annotations

EnsemblPlants:CDY29084	EnsemblPlantsGene:GSBRNA2T00041834001	InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF2	PFAM:PF03168
ProteinID:CDY29084	ProteinID:CDY29084.1	UniParc:UPI0004EDDB71	UniProt:A0A078GVC8	MapMan:35.1	:

Description

BnaC07g32900DBnaC07g32900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GVC8]

Coordinates

chrLK032229:+:506512..507184

Molecular Weight (calculated)

19196.1 Da

IEP (calculated)

10.373

GRAVY (calculated)

-0.240

Length

172 amino acids

Sequence
(BLAST)

001: MSKDCGNHAK IRPPRRHQIF AFNLSQPNLL TTNFQVTFAS RNPNSKIGIY YDRLHVYATY RNQQITLRTA IPPTYQGHKE DNVWSPFVYG TAVPIAPYNS
101: VALGDEQGRG FVGLMIRADG RVRWKVGTLI TGKYHIHVRC PAYINLGNKA AGVLVGDSAV KYTLVTKCSV SV

Best Arabidopsis Sequence Match ( AT2G35960.1 )
(BLAST)

001: MTTKDCGNHG GGGGGGTASR ICGVIIGFII IVLITIFLVW IILQPTKPRF ILQDATVYAF NLSQPNLLTS NFQITIASRN RNSRIGIYYD RLHVYATYRN
101: QQITLRTAIP PTYQGHKEDN VWSPFVYGNS VPIAPFNAVA LGDEQNRGFV TLIIRADGRV RWKVGTLITG KYHLHVRCQA FINLADKAAG VHVGENAVKY
201: MLINKCSVNV

Arabidopsis Description

NHL12NDR1/HIN1-like protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ54]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.