Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:
  • plastid 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, mitochondrion, plasma membrane, plastid
Any Predictor:endoplasmic reticulum, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034822.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid 99.06 99.06
CDY01043 Canola mitochondrion 98.58 98.58
AT3G11660.1 Thale cress plasma membrane 81.13 82.3
CDY29084 Canola mitochondrion 56.13 69.19
CDY72430 Canola cytosol 65.57 66.83
CDX90600 Canola plasma membrane 65.57 66.83
CDY69198 Canola cytosol 65.57 66.83
CDY68967 Canola cytosol 65.57 66.83
CDY32068 Canola plasma membrane 62.74 64.56
KRH72197 Soybean plasma membrane 62.74 64.25
CDY40419 Canola plasma membrane 62.26 63.46
KRH32836 Soybean plasma membrane 61.79 62.68
KRG96252 Soybean plasma membrane 59.43 60.0
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 57.55 58.94
PGSC0003DMT400072342 Potato extracellular, plasma membrane 57.55 57.82
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 57.08 57.35
PGSC0003DMT400042351 Potato extracellular, plasma membrane 56.6 56.87
CDY08687 Canola plasma membrane 51.42 52.91
CDY69513 Canola plasma membrane 51.42 52.91
CDY55755 Canola plasma membrane 51.89 51.64
KRH67997 Soybean plastid 60.85 51.19
GSMUA_Achr9P08960_001 Banana plasma membrane 48.58 49.05
CDX81001 Canola plastid 49.53 48.84
CDX98590 Canola plasma membrane 46.7 47.83
CDX92375 Canola plasma membrane 46.7 47.83
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 46.23 45.79
CDX95339 Canola plasma membrane 64.15 45.64
CDY35671 Canola plasma membrane 44.34 44.98
CDY09123 Canola plasma membrane 43.87 44.5
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 43.4 44.23
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 43.4 44.23
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 43.4 44.23
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 36.32 44.0
Os11t0157200-03 Rice plasma membrane 43.4 43.81
TraesCS5D01G133300.1 Wheat cytosol 42.92 43.75
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 43.4 43.6
EES16682 Sorghum golgi, plasma membrane, plastid 43.87 43.46
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 35.85 43.18
GSMUA_Achr8P34450_001 Banana plasma membrane 42.45 43.06
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 36.32 43.02
Os12t0159600-01 Rice plastid 42.92 42.92
GSMUA_Achr10P... Banana plasma membrane 42.45 42.65
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 42.45 42.25
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 41.98 41.98
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 41.98 41.78
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 41.98 41.78
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 41.98 41.78
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 41.98 41.78
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 18.87 41.67
Zm00001d023468_P001 Maize extracellular 41.51 41.31
HORVU7Hr1G078320.1 Barley cytosol 41.98 41.2
EES08013 Sorghum golgi, plasma membrane, plastid 41.04 40.65
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 41.04 40.28
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 42.92 40.09
Zm00001d052776_P001 Maize extracellular 40.09 39.91
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 40.57 39.81
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 40.57 39.81
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 39.62 39.25
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 39.15 38.78
Os04t0685400-01 Rice golgi, plasma membrane, plastid 40.09 38.64
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 40.09 38.46
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 40.09 38.46
EES13132 Sorghum cytosol 39.15 37.9
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 39.15 37.56
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.26 36.92
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 38.21 36.82
EES06921 Sorghum endoplasmic reticulum 36.79 36.79
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 38.68 36.77
Zm00001d016733_P001 Maize extracellular, plasma membrane 32.55 36.7
Zm00001d026664_P001 Maize extracellular 38.21 36.65
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 36.79 36.45
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 36.79 36.45
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 38.21 36.16
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 36.79 36.11
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 37.26 35.11
Os04t0416700-01 Rice golgi, plasma membrane 36.32 35.0
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 35.38 34.88
EES12138 Sorghum extracellular, golgi, plasma membrane 36.32 34.84
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 35.38 34.72
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 34.91 34.42
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 34.91 34.42
CDY20226 Canola endoplasmic reticulum, nucleus, plasma membrane 34.43 34.27
CDY14357 Canola plastid 34.43 34.27
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 34.91 34.26
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 34.91 34.26
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 34.91 34.26
HORVU5Hr1G040160.3 Barley golgi, peroxisome 43.87 34.07
CDY28821 Canola endoplasmic reticulum, nucleus, plasma membrane 33.96 33.8
CDY51789 Canola endoplasmic reticulum, nucleus, plasma membrane 33.96 33.8
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 34.43 32.59
HORVU2Hr1G040910.1 Barley peroxisome 35.85 31.93
CDY07145 Canola cytosol, peroxisome, plasma membrane 28.3 25.86
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 24.06 25.63
CDX91852 Canola cytosol, peroxisome, plasma membrane 27.36 25.33
CDY51712 Canola cytosol, peroxisome, plasma membrane 27.36 25.11
CDX74380 Canola cytosol, peroxisome, plasma membrane 26.89 24.89
Protein Annotations
EnsemblPlants:CDY08506EnsemblPlantsGene:GSBRNA2T00000280001GO:A0A078F530GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:LEA_2PANTHER:PTHR31415PANTHER:PTHR31415:SF2PFAM:PF03168ProteinID:CDY08506ProteinID:CDY08506.1
SEG:segTMHMM:TMhelixUniParc:UPI0004EE97E0UniProt:A0A078F530MapMan:35.1:
Description
BnaA05g27420DBnaA05g27420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F530]
Coordinates
chrLK031986:+:474246..474884
Molecular Weight (calculated)
23894.8 Da
IEP (calculated)
9.952
GRAVY (calculated)
0.018
Length
212 amino acids
Sequence
(BLAST)
001: MTSKDCGSHS HSRRKLIRRI IWSIIIILFI IFLTILLIWA ILQPTKPRFI LQDATVYAFN VSGNPPNLLT SNFQVTLSSR NPNDKIGVYY DRLEVYAAYQ
101: NQQITYRTSI PPTYQGHKEV NIWSPFVYGN SVPIAPFNGV SLDGDQENGV IRLDIRADGR VRWKVGAFIT GKYHLYVRCQ AFINFANKAA AGVIVGDNAV
201: KYTYAQGCSV SV
Best Arabidopsis Sequence Match ( AT3G11660.1 )
(BLAST)
001: MKDCENHGHS RRKLIRRIFW SIIFVLFIIF LTILLIWAIL QPSKPRFILQ DATVYAFNVS GNPPNLLTSN FQITLSSRNP NNKIGIYYDR LDVYATYRSQ
101: QITFPTSIPP TYQGHKDVDI WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY INFGNKANGV IVGDNAVKYT
201: FTTSCSVSV
Arabidopsis Description
NHL1NDR1/HIN1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRN0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.