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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 5
  • plastid 1
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:golgi, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 83.18 84.72
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 82.73 84.26
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 82.73 84.26
EES12138 Sorghum extracellular, golgi, plasma membrane 84.55 84.16
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 81.36 82.87
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 82.27 80.44
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 80.0 78.57
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 65.91 64.73
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 22.73 52.08
Os11t0157200-03 Rice plasma membrane 49.55 51.9
Os12t0159600-01 Rice plastid 50.0 51.89
GSMUA_Achr9P08960_001 Banana plasma membrane 43.18 45.24
VIT_06s0080g01200.t01 Wine grape plasma membrane 42.73 45.19
PGSC0003DMT400015090 Potato plasma membrane 41.36 43.75
Solyc06g074040.1.1 Tomato plasma membrane 40.45 42.79
Bra002396.1-P Field mustard plasma membrane 40.0 42.51
CDY29084 Canola mitochondrion 32.73 41.86
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 40.45 41.78
PGSC0003DMT400050538 Potato plasma membrane 39.55 41.63
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 40.45 41.59
CDX92375 Canola plasma membrane 39.09 41.55
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 39.55 41.43
Os04t0685400-01 Rice golgi, plasma membrane, plastid 41.36 41.36
Solyc11g068890.1.1 Tomato plasma membrane 39.09 41.15
CDX98590 Canola plasma membrane 38.64 41.06
CDY69513 Canola plasma membrane 37.27 39.81
CDY08687 Canola plasma membrane 37.27 39.81
Bra035001.1-P Field mustard plasma membrane 37.27 39.81
AT5G06330.1 Thale cress plasma membrane 37.27 39.61
AT3G44220.1 Thale cress plasma membrane 36.82 39.32
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 36.82 39.13
CDY09123 Canola plasma membrane 36.82 38.76
KRG96252 Soybean plasma membrane 36.82 38.57
KRH26671 Soybean plasma membrane 38.64 38.46
Bra020177.1-P Field mustard plasma membrane 36.36 38.28
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 36.36 37.91
AT3G11660.1 Thale cress plasma membrane 35.91 37.8
CDY35671 Canola plasma membrane 35.91 37.8
AT3G52470.1 Thale cress extracellular, plasma membrane 35.45 37.5
CDX90600 Canola plasma membrane 35.45 37.5
KRH32836 Soybean plasma membrane 35.45 37.32
KRH72197 Soybean plasma membrane 35.0 37.2
KRH22643 Soybean plasma membrane 36.82 37.16
AT2G35960.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 35.45 37.14
CDY72430 Canola cytosol 35.0 37.02
Bra006927.1-P Field mustard cytosol 35.0 37.02
Bra012801.1-P Field mustard plasma membrane 35.0 37.02
Bra038671.1-P Field mustard plasma membrane 35.45 36.97
PGSC0003DMT400072342 Potato extracellular, plasma membrane 35.45 36.97
CDY32068 Canola plasma membrane 34.55 36.89
CDY01043 Canola mitochondrion 35.45 36.79
CDY68967 Canola cytosol 34.55 36.54
Bra033428.1-P Field mustard cytosol 34.55 36.54
CDY69198 Canola cytosol 34.55 36.54
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 35.0 36.32
Bra034822.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid 35.0 36.32
Bra017276.1-P Field mustard plasma membrane 34.09 36.06
CDY40419 Canola plasma membrane 34.09 36.06
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 36.82 35.68
PGSC0003DMT400042351 Potato extracellular, plasma membrane 34.09 35.55
AT2G35970.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 32.73 34.12
AT5G05657.1 Thale cress plastid 20.91 33.58
AT4G09590.1 Thale cress cytosol, plasma membrane, vacuole 31.82 33.18
KRH67997 Soybean plastid 36.82 32.14
CDX81001 Canola plastid 30.91 31.63
Bra005892.1-P Field mustard plasma membrane 30.45 31.46
CDY55755 Canola plasma membrane 30.0 30.99
Os09t0532200-00 Rice plastid 27.27 27.52
CDX95339 Canola plasma membrane 34.55 25.5
Os05t0367900-01 Rice plastid 28.18 23.85
Os02t0100600-01 Rice endoplasmic reticulum, golgi, nucleus 21.82 22.43
Protein Annotations
MapMan:35.1EntrezGene:4335811EMBL:AK068271ProteinID:BAF14680.1ProteinID:BAS89161.1ProteinID:CAD40930.3
ProteinID:CAE01528.2ProteinID:EAZ30704.1GO:GO:0003674GO:GO:0004871GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006950GO:GO:0006952GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0009506GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0046658InterPro:LEA_2
EnsemblPlantsGene:Os04g0416700EnsemblPlants:Os04t0416700-01PFAM:PF03168PANTHER:PTHR31415PANTHER:PTHR31415:SF12UniProt:Q7X7T9
TMHMM:TMhelixUniParc:UPI00001B0C00RefSeq:XP_015633930.1SEG:seg::
Description
Harpin-induced 1 domain containing protein. (Os04t0416700-01)
Coordinates
chr4:-:20579386..20580531
Molecular Weight (calculated)
23559.6 Da
IEP (calculated)
8.213
GRAVY (calculated)
0.290
Length
220 amino acids
Sequence
(BLAST)
001: MGKDKHHRDW ILRRCCGSIA ACILTLAVLV GFIVLVIYLA IHPSKPSFYL QDVQLRNIDL SDPAISLNLQ VTIASRNPND RVGVYYKTLH VFTTYREEPI
101: TVPVELPAIY QGHKDVSVWS PVMSGESVPV GQYVADAMRQ DIAAGYVLLH VKVDGRVKWK VGSWVSGGYH LFVTCPALLA ASGGNVGGAF AMSATAGGGA
201: GGNATVSLKF AQAADCTVDV
Best Arabidopsis Sequence Match ( AT3G11660.1 )
(BLAST)
001: MKDCENHGHS RRKLIRRIFW SIIFVLFIIF LTILLIWAIL QPSKPRFILQ DATVYAFNVS GNPPNLLTSN FQITLSSRNP NNKIGIYYDR LDVYATYRSQ
101: QITFPTSIPP TYQGHKDVDI WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY INFGNKANGV IVGDNAVKYT
201: FTTSCSVSV
Arabidopsis Description
NHL1NDR1/HIN1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRN0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.