Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90600 | Canola | plasma membrane | 89.42 | 89.42 |
| Bra012801.1-P | Field mustard | plasma membrane | 88.94 | 88.94 |
| Bra006927.1-P | Field mustard | cytosol | 87.5 | 87.5 |
| CDY72430 | Canola | cytosol | 87.02 | 87.02 |
| CDY69198 | Canola | cytosol | 87.02 | 87.02 |
| CDY68967 | Canola | cytosol | 87.02 | 87.02 |
| CDY29084 | Canola | mitochondrion | 71.63 | 86.63 |
| Bra033428.1-P | Field mustard | cytosol | 86.54 | 86.54 |
| AT2G35960.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 80.77 | 80.0 |
| AT2G35970.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 67.79 | 66.82 |
| AT4G09590.1 | Thale cress | cytosol, plasma membrane, vacuole | 67.79 | 66.82 |
| AT3G11660.1 | Thale cress | plasma membrane | 66.83 | 66.51 |
| CDX95339 | Canola | plasma membrane | 84.62 | 59.06 |
| AT5G06330.1 | Thale cress | plasma membrane | 58.65 | 58.94 |
| KRH72197 | Soybean | plasma membrane | 56.73 | 57.0 |
| KRH32836 | Soybean | plasma membrane | 56.73 | 56.46 |
| VIT_08s0007g02350.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 55.77 | 56.04 |
| AT3G44220.1 | Thale cress | plasma membrane | 53.37 | 53.88 |
| KRG96252 | Soybean | plasma membrane | 54.33 | 53.81 |
| Solyc01g007220.2.1 | Tomato | extracellular, plasma membrane | 54.33 | 53.55 |
| PGSC0003DMT400042351 | Potato | extracellular, plasma membrane | 52.88 | 52.13 |
| PGSC0003DMT400072342 | Potato | extracellular, plasma membrane | 51.92 | 51.18 |
| AT5G22200.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 50.48 | 50.0 |
| GSMUA_Achr10P... | Banana | plasma membrane | 47.6 | 46.92 |
| AT5G05657.1 | Thale cress | plastid | 30.29 | 45.99 |
| GSMUA_Achr9P08960_001 | Banana | plasma membrane | 46.15 | 45.71 |
| TraesCS5A01G125800.1 | Wheat | golgi, plasma membrane, plastid | 45.67 | 45.67 |
| TraesCS5D01G133400.1 | Wheat | golgi, plasma membrane, plastid | 45.67 | 45.67 |
| Os11t0157200-03 | Rice | plasma membrane | 45.67 | 45.24 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular, mitochondrion, peroxisome | 38.46 | 44.69 |
| TraesCS5B01G125000.1 | Wheat | cytosol, extracellular, plasma membrane | 37.5 | 44.57 |
| KRH67997 | Soybean | plastid | 53.85 | 44.44 |
| GSMUA_AchrUn_... | Banana | cytosol, plasma membrane, plastid | 45.67 | 44.39 |
| TraesCS4B01G115700.1 | Wheat | peroxisome, plasma membrane, plastid | 45.19 | 44.13 |
| HORVU4Hr1G021190.1 | Barley | golgi, plasma membrane, plastid | 45.19 | 44.13 |
| GSMUA_Achr6P19500_001 | Banana | endoplasmic reticulum, plasma membrane | 44.71 | 44.08 |
| GSMUA_Achr8P34450_001 | Banana | plasma membrane | 44.23 | 44.02 |
| TraesCS4D01G113300.1 | Wheat | peroxisome, plasma membrane, plastid | 44.71 | 43.66 |
| TraesCS4A01G199700.1 | Wheat | golgi, plasma membrane, plastid | 44.71 | 43.66 |
| EES16682 | Sorghum | golgi, plasma membrane, plastid | 44.71 | 43.46 |
| Zm00001d052776_P001 | Maize | extracellular | 44.23 | 43.19 |
| GSMUA_Achr7P03290_001 | Banana | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 44.23 | 43.19 |
| GSMUA_Achr9P29670_001 | Banana | cytosol, extracellular, mitochondrion, plasma membrane | 36.54 | 43.18 |
| HORVU7Hr1G078320.1 | Barley | cytosol | 44.71 | 43.06 |
| TraesCS7B01G227800.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 44.71 | 43.06 |
| TraesCS7D01G323900.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 44.23 | 42.59 |
| TraesCS7A01G327200.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 44.23 | 42.59 |
| Zm00001d041927_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 43.27 | 42.45 |
| TraesCS5D01G133300.1 | Wheat | cytosol | 42.31 | 42.31 |
| TraesCS5B01G124900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 42.31 | 42.31 |
| Zm00001d023468_P001 | Maize | extracellular | 43.27 | 42.25 |
| Os12t0159600-01 | Rice | plastid | 42.79 | 41.98 |
| EES08013 | Sorghum | golgi, plasma membrane, plastid | 41.35 | 40.19 |
| Os04t0685400-01 | Rice | golgi, plasma membrane, plastid | 42.31 | 40.0 |
| Zm00001d034977_P001 | Maize | cytosol, mitochondrion, peroxisome, plasma membrane | 40.87 | 39.72 |
| GSMUA_Achr6P35580_001 | Banana | cytosol, extracellular, plastid | 18.27 | 39.58 |
| EES13132 | Sorghum | cytosol | 41.35 | 39.27 |
| Zm00001d016733_P001 | Maize | extracellular, plasma membrane | 35.1 | 38.83 |
| Zm00001d026664_P001 | Maize | extracellular | 40.87 | 38.46 |
| TraesCS2D01G596200.1 | Wheat | cytosol, golgi, plasma membrane | 40.38 | 38.01 |
| EES14353 | Sorghum | cytosol, mitochondrion, peroxisome, plasma membrane | 38.94 | 37.85 |
| TraesCS2B01G603000.1 | Wheat | cytosol, golgi, plasma membrane | 39.9 | 37.56 |
| EES06921 | Sorghum | endoplasmic reticulum | 37.98 | 37.26 |
| TraesCS2A01G583600.1 | Wheat | cytosol, golgi, plasma membrane | 39.42 | 37.1 |
| Os08t0102700-01 | Rice | cytosol, peroxisome, plasma membrane | 40.38 | 37.0 |
| HORVU2Hr1G123370.1 | Barley | cytosol, golgi, plasma membrane | 38.46 | 36.36 |
| TraesCS5A01G125600.1 | Wheat | cytosol, peroxisome, plasma membrane | 38.94 | 36.32 |
| TraesCS2D01G210700.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 37.5 | 36.28 |
| TraesCS2B01G232700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 37.5 | 36.28 |
| TraesCS2A01G205300.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 37.5 | 36.28 |
| HORVU2Hr1G073830.1 | Barley | extracellular, plasma membrane | 37.5 | 36.11 |
| TraesCS2A01G297700.1 | Wheat | extracellular, plasma membrane | 37.5 | 36.11 |
| Zm00001d003751_P001 | Maize | extracellular, golgi, plasma membrane | 38.94 | 36.0 |
| TraesCS2D01G295700.1 | Wheat | extracellular, plasma membrane | 37.02 | 35.65 |
| TraesCS2B01G313900.1 | Wheat | extracellular, plasma membrane | 37.02 | 35.65 |
| TraesCS5A01G484900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 36.54 | 35.51 |
| TraesCS5B01G498200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 36.54 | 35.51 |
| TraesCS5D01G498400.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 36.54 | 35.51 |
| Os04t0416700-01 | Rice | golgi, plasma membrane | 37.5 | 35.45 |
| HORVU5Hr1G040160.3 | Barley | golgi, peroxisome | 46.15 | 35.16 |
| EES12138 | Sorghum | extracellular, golgi, plasma membrane | 37.02 | 34.84 |
| AT5G53730.1 | Thale cress | plastid | 35.58 | 34.74 |
| HORVU5Hr1G114220.1 | Barley | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane | 35.58 | 34.26 |
| Os02t0538700-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 36.54 | 33.93 |
| Zm00001d025371_P001 | Maize | extracellular, golgi, plasma membrane | 36.06 | 33.48 |
| HORVU2Hr1G040910.1 | Barley | peroxisome | 37.5 | 32.77 |
| HORVU2Hr1G066420.1 | Barley | mitochondrion, plastid | 24.04 | 25.13 |
| AT4G01410.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 26.92 | 24.67 |
Protein Annotations
| MapMan:35.1 | EntrezGene:824412 | UniProt:A0A178VIA0 | ProteinID:AEE78949.1 | ArrayExpress:AT3G52470 | EnsemblPlantsGene:AT3G52470 |
| RefSeq:AT3G52470 | TAIR:AT3G52470 | RefSeq:AT3G52470-TAIR-G | EnsemblPlants:AT3G52470.1 | TAIR:AT3G52470.1 | EMBL:AY080785 |
| EMBL:AY088695 | EMBL:AY114041 | ProteinID:CAB43430.1 | GO:GO:0003674 | GO:GO:0004871 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046658 |
| InterPro:LEA_2 | RefSeq:NP_190815.1 | ProteinID:OAP04622.1 | PFAM:PF03168 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31415 | PANTHER:PTHR31415:SF2 |
| UniProt:Q9SVC8 | TMHMM:TMhelix | UniParc:UPI00000A7477 | SEG:seg | : | : |
Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:UniProtKB/TrEMBL;Acc:Q9SVC8]
Coordinates
chr3:+:19450506..19451982
Molecular Weight (calculated)
23099.4 Da
IEP (calculated)
10.206
GRAVY (calculated)
0.182
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKDCGNHGG GKEVVVRKLC AAIIAFIVIV LITIFLVWVI LRPTKPRFVL QDATVYAFNL SQPNLLTSNF QVTIASRNPN SKIGIYYDRL HVYATYMNQQ
101: ITLRTAIPPT YQGHKEVNVW SPFVYGTAVP IAPYNSVALG EEKDRGFVGL MIRADGTVRW KVRTLITGKY HIHVRCQAFI NLGNKAAGVL VGDNAVKYTL
201: ANKCSVNV
101: ITLRTAIPPT YQGHKEVNVW SPFVYGTAVP IAPYNSVALG EEKDRGFVGL MIRADGTVRW KVRTLITGKY HIHVRCQAFI NLGNKAAGVL VGDNAVKYTL
201: ANKCSVNV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.