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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, secretory
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
 extracellular: 20408568
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES13132 Sorghum cytosol 92.31 93.15
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 83.26 83.26
Os04t0685400-01 Rice golgi, plasma membrane, plastid 81.9 82.27
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 81.9 81.9
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 81.9 81.9
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 81.45 81.82
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 64.71 66.82
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 44.8 56.25
GSMUA_Achr10P... Banana plasma membrane 53.39 55.92
GSMUA_Achr8P34450_001 Banana plasma membrane 50.23 53.11
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 49.32 51.42
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 41.63 51.4
Zm00001d023468_P001 Maize extracellular 49.32 51.17
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 48.42 50.71
PGSC0003DMT400015090 Potato plasma membrane 46.15 49.04
Solyc06g074040.1.1 Tomato plasma membrane 44.8 47.6
VIT_06s0080g01200.t01 Wine grape plasma membrane 44.8 47.6
Zm00001d016733_P001 Maize extracellular, plasma membrane 40.27 47.34
Zm00001d052776_P001 Maize extracellular 45.25 46.95
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 44.8 46.48
KRH26671 Soybean plasma membrane 46.15 46.15
Bra035001.1-P Field mustard plasma membrane 42.53 45.63
CDY69513 Canola plasma membrane 42.53 45.63
CDY08687 Canola plasma membrane 42.53 45.63
PGSC0003DMT400050538 Potato plasma membrane 42.99 45.45
Solyc11g068890.1.1 Tomato plasma membrane 42.99 45.45
AT3G44220.1 Thale cress plasma membrane 42.08 45.15
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 45.7 45.09
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 42.08 44.29
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 44.8 44.0
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 42.08 43.46
Bra012801.1-P Field mustard plasma membrane 40.27 42.79
CDY72430 Canola cytosol 40.27 42.79
CDX90600 Canola plasma membrane 40.27 42.79
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 39.82 42.51
Bra033428.1-P Field mustard cytosol 39.82 42.31
Bra006927.1-P Field mustard cytosol 39.37 41.83
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 40.27 41.78
CDY69198 Canola cytosol 38.91 41.35
CDY68967 Canola cytosol 38.91 41.35
KRH22643 Soybean plasma membrane 40.72 41.28
Bra002396.1-P Field mustard plasma membrane 38.46 41.06
KRG96252 Soybean plasma membrane 38.91 40.95
AT3G52470.1 Thale cress extracellular, plasma membrane 38.46 40.87
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 38.91 40.76
PGSC0003DMT400042351 Potato extracellular, plasma membrane 38.91 40.76
CDX92375 Canola plasma membrane 38.01 40.58
KRH72197 Soybean plasma membrane 38.01 40.58
PGSC0003DMT400072342 Potato extracellular, plasma membrane 38.46 40.28
KRH32836 Soybean plasma membrane 38.01 40.19
CDY29084 Canola mitochondrion 31.22 40.12
CDX98590 Canola plasma membrane 37.56 40.1
AT3G11660.1 Thale cress plasma membrane 37.56 39.71
AT2G35960.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 37.56 39.52
CDY32068 Canola plasma membrane 36.65 39.32
AT5G06330.1 Thale cress plasma membrane 36.65 39.13
Bra038671.1-P Field mustard plasma membrane 37.1 38.86
CDY35671 Canola plasma membrane 36.65 38.76
CDY40419 Canola plasma membrane 36.2 38.46
Bra017276.1-P Field mustard plasma membrane 36.2 38.46
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 36.65 38.21
Bra034822.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid 36.65 38.21
CDY01043 Canola mitochondrion 36.65 38.21
CDY09123 Canola plasma membrane 35.29 37.32
AT2G35970.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 35.29 36.97
AT4G09590.1 Thale cress cytosol, plasma membrane, vacuole 35.29 36.97
Bra020177.1-P Field mustard plasma membrane 34.84 36.84
CDY55755 Canola plasma membrane 34.84 36.15
KRH67997 Soybean plastid 40.72 35.71
Bra005892.1-P Field mustard plasma membrane 34.39 35.68
CDX81001 Canola plastid 33.94 34.88
AT5G05657.1 Thale cress plastid 20.81 33.58
CDX95339 Canola plasma membrane 39.37 29.19
Zm00001d021289_P001 Maize mitochondrion 26.24 26.48
Zm00001d037915_P001 Maize cytosol, peroxisome, plastid 29.86 25.19
Protein Annotations
EMBL:BT037678EMBL:EU967361EnsemblPlants:Zm00001d026664_P001EnsemblPlants:Zm00001d026664_T001EnsemblPlantsGene:Zm00001d026664EntrezGene:100216955
GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:LEA_2PANTHER:PTHR31415PANTHER:PTHR31415:SF8
PFAM:PF03168ProteinID:AQK47415.1SEG:segTMHMM:TMhelixUniParc:UPI00017B69E5UniProt:B4FKP0
MapMan:35.1:::::
Description
NDR1/HIN1-like 1
Coordinates
chr10:-:149609177..149610110
Molecular Weight (calculated)
24280.3 Da
IEP (calculated)
8.377
GRAVY (calculated)
0.113
Length
221 amino acids
Sequence
(BLAST)
001: MAVKDCGGHK GCECERERLY RRCCAAVVAL ILLVLFIVLV VWLVLRPHKP RFYLQDLSVL CLNVTPPAST YLFTTMQATV AARNPNERVG VYYDQADAYA
101: EYKGVAITVP TRLPVQYQGP RDASVWSPFL RAPEGGVQLP PQLAVALAQD ETAGYVLVDV RVDGWVRWKV GTSWISGHYH LRVNCPALLT VNDGRGSYGA
201: NTGGGTGYFR FQQAAACAVD V
Best Arabidopsis Sequence Match ( AT3G11660.1 )
(BLAST)
001: MKDCENHGHS RRKLIRRIFW SIIFVLFIIF LTILLIWAIL QPSKPRFILQ DATVYAFNVS GNPPNLLTSN FQITLSSRNP NNKIGIYYDR LDVYATYRSQ
101: QITFPTSIPP TYQGHKDVDI WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY INFGNKANGV IVGDNAVKYT
201: FTTSCSVSV
Arabidopsis Description
NHL1NDR1/HIN1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRN0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.