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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69513 Canola plasma membrane 94.17 94.17
Bra035001.1-P Field mustard plasma membrane 94.17 94.17
CDY08687 Canola plasma membrane 93.69 93.69
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 74.27 72.86
PGSC0003DMT400015090 Potato plasma membrane 59.71 59.13
Solyc06g074040.1.1 Tomato plasma membrane 59.22 58.65
VIT_06s0080g01200.t01 Wine grape plasma membrane 58.25 57.69
Solyc11g068890.1.1 Tomato plasma membrane 55.83 55.02
PGSC0003DMT400050538 Potato plasma membrane 55.83 55.02
AT3G11660.1 Thale cress plasma membrane 54.37 53.59
AT3G52470.1 Thale cress extracellular, plasma membrane 53.88 53.37
KRH26671 Soybean plasma membrane 56.31 52.49
AT5G06330.1 Thale cress plasma membrane 52.43 52.17
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 53.4 51.64
AT2G35960.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 52.43 51.43
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 53.4 51.4
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 23.3 50.0
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 42.23 49.43
AT4G09590.1 Thale cress cytosol, plasma membrane, vacuole 49.51 48.34
GSMUA_Achr10P... Banana plasma membrane 49.51 48.34
KRH22643 Soybean plasma membrane 50.97 48.17
AT2G35970.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 49.03 47.87
GSMUA_Achr9P08960_001 Banana plasma membrane 48.54 47.62
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 48.06 46.92
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 39.32 46.29
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 47.57 46.01
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 45.63 45.19
GSMUA_Achr8P34450_001 Banana plasma membrane 45.63 44.98
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 46.6 44.86
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 45.15 44.71
Os11t0157200-03 Rice plasma membrane 45.15 44.29
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 44.66 44.23
Zm00001d016733_P001 Maize extracellular, plasma membrane 40.29 44.15
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 38.35 44.13
HORVU7Hr1G078320.1 Barley cytosol 46.12 43.98
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 46.12 43.98
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 46.12 43.98
EES16682 Sorghum golgi, plasma membrane, plastid 45.63 43.93
Os12t0159600-01 Rice plastid 45.15 43.87
TraesCS5D01G133300.1 Wheat cytosol 44.17 43.75
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 45.63 43.52
Zm00001d052776_P001 Maize extracellular 44.66 43.19
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 44.17 42.92
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 44.17 42.72
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 45.63 42.53
Zm00001d023468_P001 Maize extracellular 43.69 42.25
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 43.69 42.25
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 43.69 42.25
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 43.69 42.25
Zm00001d026664_P001 Maize extracellular 45.15 42.08
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 43.69 42.06
EES13132 Sorghum cytosol 44.66 42.01
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 43.69 41.86
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 43.69 41.86
Os04t0685400-01 Rice golgi, plasma membrane, plastid 44.66 41.82
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 44.66 41.63
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 43.2 41.59
EES08013 Sorghum golgi, plasma membrane, plastid 43.2 41.59
EES06921 Sorghum endoplasmic reticulum 42.72 41.51
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 44.17 41.18
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 42.72 40.93
AT5G05657.1 Thale cress plastid 27.18 40.88
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 43.2 40.45
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 42.72 39.29
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 40.78 38.89
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 40.29 38.78
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 40.29 38.78
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 40.29 38.78
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 40.29 38.43
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 40.29 38.43
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 40.29 38.43
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 40.29 38.43
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 42.23 38.33
EES12138 Sorghum extracellular, golgi, plasma membrane 40.78 38.01
HORVU2Hr1G040910.1 Barley peroxisome 43.69 37.82
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 40.78 37.67
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 40.29 36.89
Os04t0416700-01 Rice golgi, plasma membrane 39.32 36.82
AT5G53730.1 Thale cress plastid 37.86 36.62
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 39.81 36.61
HORVU5Hr1G040160.3 Barley golgi, peroxisome 45.63 34.43
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 24.76 25.63
AT4G01410.1 Thale cress endoplasmic reticulum, peroxisome, plasma membrane 28.16 25.55
Protein Annotations
MapMan:35.1EntrezGene:823546UniProt:A0A178VHQ6ProteinID:AEE77877.1ArrayExpress:AT3G44220EnsemblPlantsGene:AT3G44220
RefSeq:AT3G44220TAIR:AT3G44220RefSeq:AT3G44220-TAIR-GEnsemblPlants:AT3G44220.1TAIR:AT3G44220.1EMBL:BT014806
EMBL:BT015025ProteinID:CAB88990.1GO:GO:0003674GO:GO:0004871GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006950GO:GO:0006952GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0009506GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0046658InterPro:LEA_2
RefSeq:NP_190008.1ProteinID:OAP04553.1PFAM:PF03168PO:PO:0000293PANTHER:PTHR31415PANTHER:PTHR31415:SF17
UniProt:Q9LXM6TMHMM:TMhelixUniParc:UPI00000A32A8SEG:seg::
Description
At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
Coordinates
chr3:+:15927939..15929839
Molecular Weight (calculated)
23255.1 Da
IEP (calculated)
8.092
GRAVY (calculated)
0.076
Length
206 amino acids
Sequence
(BLAST)
001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.