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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • plasma membrane 3
  • plastid 1
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:extracellular, plasma membrane, plastid
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 98.15 98.15
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 97.69 97.69
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 97.69 97.69
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 73.61 74.3
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 73.61 74.3
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 74.54 70.93
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 64.35 63.18
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 44.44 54.55
GSMUA_Achr10P... Banana plasma membrane 52.78 54.03
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 43.06 51.96
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 50.0 50.7
PGSC0003DMT400050538 Potato plasma membrane 48.61 50.24
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 48.61 49.76
GSMUA_Achr8P34450_001 Banana plasma membrane 48.15 49.76
Solyc11g068890.1.1 Tomato plasma membrane 47.69 49.28
PGSC0003DMT400015090 Potato plasma membrane 47.22 49.04
Solyc06g074040.1.1 Tomato plasma membrane 47.22 49.04
Bra035001.1-P Field mustard plasma membrane 44.91 47.09
CDY69513 Canola plasma membrane 44.91 47.09
CDY08687 Canola plasma membrane 44.91 47.09
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 46.3 46.95
AT3G44220.1 Thale cress plasma membrane 43.98 46.12
KRH72197 Soybean plasma membrane 43.52 45.41
KRH26671 Soybean plasma membrane 46.3 45.25
KRG96252 Soybean plasma membrane 43.98 45.24
VIT_06s0080g01200.t01 Wine grape plasma membrane 43.06 44.71
AT3G52470.1 Thale cress extracellular, plasma membrane 43.06 44.71
KRH32836 Soybean plasma membrane 43.06 44.5
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 43.06 44.29
Bra012801.1-P Field mustard plasma membrane 42.59 44.23
CDY72430 Canola cytosol 42.59 44.23
CDX90600 Canola plasma membrane 42.59 44.23
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 43.06 44.08
PGSC0003DMT400042351 Potato extracellular, plasma membrane 43.06 44.08
AT5G06330.1 Thale cress plasma membrane 42.13 43.96
Bra033428.1-P Field mustard cytosol 42.13 43.75
CDY29084 Canola mitochondrion 34.72 43.6
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 41.67 43.48
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 43.06 43.46
Bra006927.1-P Field mustard cytosol 41.67 43.27
CDY32068 Canola plasma membrane 41.2 43.2
AT3G11660.1 Thale cress plasma membrane 41.67 43.06
CDY68967 Canola cytosol 41.2 42.79
CDY69198 Canola cytosol 41.2 42.79
Bra038671.1-P Field mustard plasma membrane 41.67 42.65
AT2G35960.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 41.2 42.38
Bra034822.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid 41.2 41.98
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 41.2 41.98
CDY01043 Canola mitochondrion 40.74 41.51
Bra017276.1-P Field mustard plasma membrane 39.81 41.35
CDY40419 Canola plasma membrane 39.81 41.35
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 40.74 41.31
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 41.2 41.2
Bra002396.1-P Field mustard plasma membrane 39.35 41.06
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 40.74 40.74
CDX92375 Canola plasma membrane 38.89 40.58
KRH22643 Soybean plasma membrane 40.74 40.37
PGSC0003DMT400072342 Potato extracellular, plasma membrane 39.35 40.28
CDX98590 Canola plasma membrane 38.43 40.1
HORVU5Hr1G040160.3 Barley golgi, peroxisome 50.0 39.56
AT4G09590.1 Thale cress cytosol, plasma membrane, vacuole 38.43 39.34
AT2G35970.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 37.96 38.86
HORVU2Hr1G040910.1 Barley peroxisome 42.13 38.24
CDY35671 Canola plasma membrane 36.57 37.8
CDY55755 Canola plasma membrane 37.04 37.56
KRH67997 Soybean plastid 43.52 37.3
Bra005892.1-P Field mustard plasma membrane 36.57 37.09
CDY09123 Canola plasma membrane 35.65 36.84
AT5G05657.1 Thale cress plastid 23.15 36.5
Bra020177.1-P Field mustard plasma membrane 34.72 35.89
CDX81001 Canola plastid 35.65 35.81
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 28.24 30.65
CDX95339 Canola plasma membrane 41.67 30.2
HORVU6Hr1G083970.1 Barley endoplasmic reticulum, peroxisome, plasma membrane 27.78 29.41
HORVU5Hr1G026690.1 Barley nucleus 27.31 28.37
HORVU1Hr1G058400.1 Barley cytosol, endoplasmic reticulum, peroxisome 33.33 27.48
HORVU5Hr1G081610.1 Barley golgi, nucleus, plastid 32.41 26.62
Protein Annotations
EMBL:AK357296EnsemblPlants:HORVU7Hr1G078320.1EnsemblPlantsGene:HORVU7Hr1G078320GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:LEA_2PANTHER:PTHR31415PANTHER:PTHR31415:SF7PFAM:PF03168SEG:segTMHMM:TMhelix
UniParc:UPI0002004FA6UniProt:F2D089MapMan:35.1:::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D089]
Coordinates
chrchr7H:+:459752088..459753631
Molecular Weight (calculated)
23770.9 Da
IEP (calculated)
9.155
GRAVY (calculated)
0.292
Length
216 amino acids
Sequence
(BLAST)
001: MSIKHCDKHD CERRRLYRQF CAALVAIILL ILLIILIVWL VLRPTRPRFY LNDLTVACLN ATSNPASYLT VTLQATIAAR NPNTRVGIYF DRTDAYAEYK
101: GQQVTVPTAL PVVYQGHLDV SVWSPFLVGS NVPLAPYLAV ALAQDETAGY VLLTVRVDGW IRWKAGAFIT GHYHLRVRCP ALLTVNGGQG SYGSIAGGGG
201: NGYFNFQRAA PCVVDV
Best Arabidopsis Sequence Match ( AT3G11660.1 )
(BLAST)
001: MKDCENHGHS RRKLIRRIFW SIIFVLFIIF LTILLIWAIL QPSKPRFILQ DATVYAFNVS GNPPNLLTSN FQITLSSRNP NNKIGIYYDR LDVYATYRSQ
101: QITFPTSIPP TYQGHKDVDI WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY INFGNKANGV IVGDNAVKYT
201: FTTSCSVSV
Arabidopsis Description
NHL1NDR1/HIN1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRN0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.