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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012801.1-P Field mustard plasma membrane 99.52 99.52
CDY72430 Canola cytosol 96.15 96.15
CDY29084 Canola mitochondrion 78.85 95.35
CDY69198 Canola cytosol 94.71 94.71
CDY68967 Canola cytosol 94.71 94.71
AT3G52470.1 Thale cress extracellular, plasma membrane 89.42 89.42
CDY32068 Canola plasma membrane 77.4 78.16
CDY40419 Canola plasma membrane 76.92 76.92
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 66.83 65.57
CDX95339 Canola plasma membrane 93.27 65.1
CDY01043 Canola mitochondrion 66.35 65.09
KRH72197 Soybean plasma membrane 56.73 57.0
KRH32836 Soybean plasma membrane 57.21 56.94
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.77 56.04
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 56.73 55.92
CDY08687 Canola plasma membrane 54.81 55.34
CDY69513 Canola plasma membrane 54.81 55.34
KRG96252 Soybean plasma membrane 55.77 55.24
PGSC0003DMT400042351 Potato extracellular, plasma membrane 54.33 53.55
PGSC0003DMT400072342 Potato extracellular, plasma membrane 52.4 51.66
CDY55755 Canola plasma membrane 52.4 51.17
CDX81001 Canola plastid 51.44 49.77
GSMUA_Achr9P08960_001 Banana plasma membrane 49.04 48.57
GSMUA_Achr10P... Banana plasma membrane 48.56 47.87
CDY35671 Canola plasma membrane 47.6 47.37
CDX98590 Canola plasma membrane 47.12 47.34
CDX92375 Canola plasma membrane 47.12 47.34
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 47.12 47.12
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 47.12 47.12
Os11t0157200-03 Rice plasma membrane 47.12 46.67
GSMUA_Achr8P34450_001 Banana plasma membrane 46.63 46.41
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 47.12 45.79
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 38.46 45.71
KRH67997 Soybean plastid 55.29 45.63
Zm00001d052776_P001 Maize extracellular 46.63 45.54
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 46.63 45.54
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 46.63 45.54
CDY09123 Canola plasma membrane 45.67 45.45
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 46.15 45.07
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 46.15 45.07
EES16682 Sorghum golgi, plasma membrane, plastid 46.15 44.86
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 45.67 44.6
Os12t0159600-01 Rice plastid 45.19 44.34
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 37.5 44.32
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 37.98 44.13
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 44.71 44.08
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 43.75 43.75
Zm00001d023468_P001 Maize extracellular 44.71 43.66
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 44.23 43.4
TraesCS5D01G133300.1 Wheat cytosol 43.27 43.27
HORVU7Hr1G078320.1 Barley cytosol 44.23 42.59
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 44.23 42.59
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 43.75 42.13
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 43.75 42.13
EES08013 Sorghum golgi, plasma membrane, plastid 43.27 42.06
Zm00001d016733_P001 Maize extracellular, plasma membrane 37.5 41.49
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 41.83 40.65
EES13132 Sorghum cytosol 42.79 40.64
Os04t0685400-01 Rice golgi, plasma membrane, plastid 42.79 40.45
Zm00001d026664_P001 Maize extracellular 42.79 40.27
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 18.27 39.58
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 40.38 39.25
EES06921 Sorghum endoplasmic reticulum 39.42 38.68
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 40.87 38.46
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 40.38 38.01
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 40.38 38.01
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 38.94 37.67
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 38.94 37.67
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 38.94 37.67
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 40.87 37.44
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 39.9 37.22
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 38.46 37.04
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 38.94 36.82
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 37.98 36.57
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 37.98 36.57
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 37.98 36.57
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.5 36.45
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.5 36.45
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.5 36.45
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 39.42 36.44
HORVU5Hr1G040160.3 Barley golgi, peroxisome 47.6 36.26
EES12138 Sorghum extracellular, golgi, plasma membrane 37.98 35.75
Os04t0416700-01 Rice golgi, plasma membrane 37.5 35.45
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 37.98 35.27
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 36.54 35.19
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 37.02 34.38
HORVU2Hr1G040910.1 Barley peroxisome 38.94 34.03
CDY14357 Canola plastid 34.62 33.8
CDY51789 Canola endoplasmic reticulum, nucleus, plasma membrane 34.13 33.33
CDY28821 Canola endoplasmic reticulum, nucleus, plasma membrane 34.13 33.33
CDY20226 Canola endoplasmic reticulum, nucleus, plasma membrane 33.65 32.86
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 23.56 24.62
CDY51712 Canola cytosol, peroxisome, plasma membrane 26.92 24.24
CDX91852 Canola cytosol, peroxisome, plasma membrane 26.44 24.02
CDX74380 Canola cytosol, peroxisome, plasma membrane 25.96 23.58
CDY07145 Canola cytosol, peroxisome, plasma membrane 25.96 23.28
Protein Annotations
EnsemblPlants:CDX90600EnsemblPlantsGene:GSBRNA2T00151239001GO:A0A078DN68InterPro:LEA_2PANTHER:PTHR31415PANTHER:PTHR31415:SF2
PFAM:PF03168ProteinID:CDX90600ProteinID:CDX90600.1SEG:segTMHMM:TMhelixUniParc:UPI0004EE68AE
MapMan:35.1:::::
Description
BnaA03g41810D
Coordinates
chrLK031863:-:1056636..1057616
Molecular Weight (calculated)
23015.1 Da
IEP (calculated)
10.247
GRAVY (calculated)
0.151
Length
208 amino acids
Sequence
(BLAST)
001: MSKDCGNHGG GKEAAVRRIC AAVIAFIIIV LITIFLVWVI LRPTKPRFIL QDATVFAFNL SQPNLLTTNF QVTFASRNPN SKIGIYYDRL HVYATYRNQQ
101: ITLRTAIPPT YQGHKEDNVW SPFVYGTAVP IAPYNSVALG DEQGRGFVGL MIRADGRVRW KVGTLITGKY HIHVRCPAYI NLGNKAAGVL VGDSAVKYTL
201: VTKCSVNV
Best Arabidopsis Sequence Match ( AT3G52470.1 )
(BLAST)
001: MSKDCGNHGG GKEVVVRKLC AAIIAFIVIV LITIFLVWVI LRPTKPRFVL QDATVYAFNL SQPNLLTSNF QVTIASRNPN SKIGIYYDRL HVYATYMNQQ
101: ITLRTAIPPT YQGHKEVNVW SPFVYGTAVP IAPYNSVALG EEKDRGFVGL MIRADGTVRW KVRTLITGKY HIHVRCQAFI NLGNKAAGVL VGDNAVKYTL
201: ANKCSVNV
Arabidopsis Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:UniProtKB/TrEMBL;Acc:Q9SVC8]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.