Factsheet for GSMUA_Achr6P19500_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, endoplasmic reticulum

Predictor Summary:

plastid 1
mitochondrion 2
endoplasmic reticulum 4
plasma membrane 5
extracellular 3
golgi 3
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P29670_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	63.03	75.57
GSMUA_Achr10P...	Banana	plasma membrane	68.72	68.72
GSMUA_Achr11P...	Banana	cytosol, extracellular, mitochondrion, peroxisome	56.87	67.04
GSMUA_Achr8P34450_001	Banana	plasma membrane	60.66	61.24
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	27.01	59.38
GSMUA_Achr9P08960_001	Banana	plasma membrane	58.77	59.05
GSMUA_Achr7P03290_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	54.98	54.46
PGSC0003DMT400015090	Potato	plasma membrane	50.24	50.96
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	51.18	50.47
CDY08687	Canola	plasma membrane	48.82	50.0
Solyc06g074040.1.1	Tomato	plasma membrane	49.29	50.0
CDY69513	Canola	plasma membrane	48.34	49.51
Bra035001.1-P	Field mustard	plasma membrane	48.34	49.51
Solyc11g068890.1.1	Tomato	plasma membrane	48.82	49.28
PGSC0003DMT400050538	Potato	plasma membrane	48.34	48.8
HORVU7Hr1G078320.1	Barley	cytosol	49.76	48.61
TraesCS7A01G327200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	49.76	48.61
TraesCS7D01G323900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	49.76	48.61
Zm00001d026664_P001	Maize	extracellular	50.71	48.42
TraesCS2D01G596200.1	Wheat	cytosol, golgi, plasma membrane	50.71	48.42
EES13132	Sorghum	cytosol	50.24	48.4
TraesCS7B01G227800.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	49.29	48.15
AT3G44220.1	Thale cress	plasma membrane	46.92	48.06
TraesCS2A01G583600.1	Wheat	cytosol, golgi, plasma membrane	50.24	47.96
HORVU2Hr1G123370.1	Barley	cytosol, golgi, plasma membrane	49.76	47.73
Os04t0685400-01	Rice	golgi, plasma membrane, plastid	49.76	47.73
TraesCS2B01G603000.1	Wheat	cytosol, golgi, plasma membrane	49.76	47.51
Os08t0102700-01	Rice	cytosol, peroxisome, plasma membrane	50.71	47.14
Zm00001d034977_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	46.92	46.26
AT3G11660.1	Thale cress	plasma membrane	45.5	45.93
CDY29084	Canola	mitochondrion	37.44	45.93
KRG96252	Soybean	plasma membrane	45.5	45.71
EES14353	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	45.97	45.33
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	44.08	44.93
CDX90600	Canola	plasma membrane	44.08	44.71
AT3G52470.1	Thale cress	extracellular, plasma membrane	44.08	44.71
Bra006927.1-P	Field mustard	cytosol	44.08	44.71
Bra002396.1-P	Field mustard	plasma membrane	43.6	44.44
KRH72197	Soybean	plasma membrane	43.6	44.44
Bra012801.1-P	Field mustard	plasma membrane	43.6	44.23
CDY69198	Canola	cytosol	43.6	44.23
VIT_06s0080g01200.t01	Wine grape	plasma membrane	43.6	44.23
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	44.55	44.13
Bra038671.1-P	Field mustard	plasma membrane	44.08	44.08
KRH32836	Soybean	plasma membrane	43.6	44.02
KRH26671	Soybean	plasma membrane	45.97	43.89
Bra034822.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid	44.08	43.87
CDY72430	Canola	cytosol	43.13	43.75
CDY68967	Canola	cytosol	43.13	43.75
CDX92375	Canola	plasma membrane	42.65	43.48
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	44.08	43.46
CDY01043	Canola	mitochondrion	43.6	43.4
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	43.6	43.4
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	43.13	43.33
Bra033428.1-P	Field mustard	cytosol	42.65	43.27
KRH22643	Soybean	plasma membrane	44.55	43.12
CDX98590	Canola	plasma membrane	42.18	43.0
GSMUA_Achr4P18020_001	Banana	cytosol, endoplasmic reticulum, golgi, plastid	42.65	42.86
CDY32068	Canola	plasma membrane	41.71	42.72
CDY09123	Canola	plasma membrane	42.18	42.58
CDY35671	Canola	plasma membrane	41.71	42.11
Bra017276.1-P	Field mustard	plasma membrane	41.23	41.83
CDY40419	Canola	plasma membrane	41.23	41.83
GSMUA_Achr5P14440_001	Banana	cytosol, endoplasmic reticulum, plasma membrane, plastid	41.23	41.83
Bra020177.1-P	Field mustard	plasma membrane	41.23	41.63
AT2G35960.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	40.76	40.95
AT5G06330.1	Thale cress	plasma membrane	39.81	40.58
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	40.28	40.28
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	39.81	39.81
AT2G35970.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	38.86	38.86
AT4G09590.1	Thale cress	cytosol, plasma membrane, vacuole	38.39	38.39
KRH67997	Soybean	plastid	45.5	38.1
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	37.91	37.91
Bra005892.1-P	Field mustard	plasma membrane	36.97	36.62
CDY55755	Canola	plasma membrane	36.97	36.62
AT5G05657.1	Thale cress	plastid	23.7	36.5
CDX81001	Canola	plastid	36.97	36.28
CDX95339	Canola	plasma membrane	41.23	29.19
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	26.54	27.86

Protein Annotations

EnsemblPlants:GSMUA_Achr6P19500_001	EnsemblPlants:GSMUA_Achr6T19500_001	EnsemblPlantsGene:GSMUA_Achr6G19500_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF2	PFAM:PF03168	SEG:seg	TMHMM:TMhelix
UniParc:UPI000295D3FA	UniProt:M0T8E8	MapMan:35.1	:	:	:

Description

harpin-induced protein 1 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G19500_001]

Coordinates

chr6:-:13806913..13807548

Molecular Weight (calculated)

23492.6 Da

IEP (calculated)

9.592

GRAVY (calculated)

0.252

Length

211 amino acids

Sequence
(BLAST)

001: MAKDCGIHGK HKRHKLFLRL LAAFLSLVVV LLLAVLIVWL VLRPTKPMFY LQDFSLLQFN FTHGDAALLT SVLQVTLSSR NPNGRIGIYY DRLDAYAAYK
101: GQQFTAATFL PPGYLGHNDV AIWSPYLYGT AVPLAPYLAD SISQDESAGY LLLYVRVDGR LRWKVGTWIS GHYRLQANCP AFLIVDSGKS QSDAPAPIVR
201: FQQNTACSVV V

Best Arabidopsis Sequence Match ( AT2G35960.1 )
(BLAST)

001: MTTKDCGNHG GGGGGGTASR ICGVIIGFII IVLITIFLVW IILQPTKPRF ILQDATVYAF NLSQPNLLTS NFQITIASRN RNSRIGIYYD RLHVYATYRN
101: QQITLRTAIP PTYQGHKEDN VWSPFVYGNS VPIAPFNAVA LGDEQNRGFV TLIIRADGRV RWKVGTLITG KYHLHVRCQA FINLADKAAG VHVGENAVKY
201: MLINKCSVNV

Arabidopsis Description

NHL12NDR1/HIN1-like protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ54]
SUBAcon: [golgi,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.