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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT3G11660.1 Thale cress plasma membrane 66.67 66.03
AT5G05657.1 Thale cress plastid 40.1 60.58
AT2G35960.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 59.9 59.05
AT3G52470.1 Thale cress extracellular, plasma membrane 58.94 58.65
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 57.97 57.97
KRH72197 Soybean plasma membrane 55.56 55.56
KRH32836 Soybean plasma membrane 54.59 54.07
Bra005892.1-P Field mustard plasma membrane 54.59 53.05
CDY55755 Canola plasma membrane 54.59 53.05
AT3G44220.1 Thale cress plasma membrane 52.17 52.43
AT2G35970.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 53.14 52.13
AT4G09590.1 Thale cress cytosol, plasma membrane, vacuole 52.66 51.66
KRG96252 Soybean plasma membrane 52.17 51.43
CDX81001 Canola plastid 53.14 51.16
GSMUA_Achr9P08960_001 Banana plasma membrane 51.69 50.95
PGSC0003DMT400042351 Potato extracellular, plasma membrane 51.69 50.71
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 51.21 50.24
PGSC0003DMT400072342 Potato extracellular, plasma membrane 50.72 49.76
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 48.31 47.62
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 37.2 44.0
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 43.96 43.75
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 20.29 43.75
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 43.96 43.75
EES16682 Sorghum golgi, plasma membrane, plastid 44.93 43.46
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 44.44 43.4
TraesCS5D01G133300.1 Wheat cytosol 43.48 43.27
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 37.2 43.02
Os12t0159600-01 Rice plastid 43.96 42.92
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 43.0 42.79
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 43.96 42.72
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 43.96 42.72
GSMUA_Achr8P34450_001 Banana plasma membrane 43.0 42.58
KRH67997 Soybean plastid 51.69 42.46
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 43.48 42.25
Zm00001d052776_P001 Maize extracellular 43.48 42.25
HORVU7Hr1G078320.1 Barley cytosol 43.96 42.13
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 43.48 42.06
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 35.75 42.05
Os11t0157200-03 Rice plasma membrane 42.51 41.9
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 43.0 41.78
Zm00001d016733_P001 Maize extracellular, plasma membrane 37.68 41.49
Zm00001d023468_P001 Maize extracellular 42.51 41.31
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 43.0 41.2
GSMUA_Achr10P... Banana plasma membrane 41.55 40.76
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 42.51 40.74
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 42.51 40.74
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 41.55 40.38
EES08013 Sorghum golgi, plasma membrane, plastid 41.55 40.19
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 40.58 39.81
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 42.03 39.37
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 40.58 39.25
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 40.1 38.78
EES06921 Sorghum endoplasmic reticulum 39.61 38.68
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 41.06 38.46
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 42.03 38.33
Os04t0685400-01 Rice golgi, plasma membrane, plastid 40.58 38.18
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 40.58 38.01
EES13132 Sorghum cytosol 40.1 37.9
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 39.13 37.5
Os04t0416700-01 Rice golgi, plasma membrane 39.61 37.27
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 39.61 37.27
EES12138 Sorghum extracellular, golgi, plasma membrane 39.61 37.1
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 38.65 37.04
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 38.16 36.74
Zm00001d026664_P001 Maize extracellular 39.13 36.65
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 38.16 36.57
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 38.16 36.57
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 39.13 36.32
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 39.13 36.0
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.2 35.98
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.2 35.98
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.2 35.98
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 37.2 35.81
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 37.2 35.81
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 38.65 35.71
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 36.72 35.19
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 37.2 34.38
AT5G53730.1 Thale cress plastid 35.27 34.27
HORVU5Hr1G040160.3 Barley golgi, peroxisome 43.96 33.33
HORVU2Hr1G040910.1 Barley peroxisome 37.68 32.77
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 26.09 27.14
AT4G01410.1 Thale cress endoplasmic reticulum, peroxisome, plasma membrane 28.5 25.99
Protein Annotations
MapMan:35.1EntrezGene:830521UniProt:A0A178UFY8ProteinID:AED91003.1ArrayExpress:AT5G06330EnsemblPlantsGene:AT5G06330
RefSeq:AT5G06330TAIR:AT5G06330RefSeq:AT5G06330-TAIR-GEnsemblPlants:AT5G06330.1TAIR:AT5G06330.1ProteinID:BAB08955.1
EMBL:BT010935EMBL:BT011644GO:GO:0003674GO:GO:0004871GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006950GO:GO:0006952GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0009506GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0046658InterPro:LEA_2
RefSeq:NP_196251.1ProteinID:OAO92615.1PFAM:PF03168PO:PO:0000293PO:PO:0007611PO:PO:0007616
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0025022PANTHER:PTHR31415PANTHER:PTHR31415:SF2
UniProt:Q9FNH5TMHMM:TMhelixUniParc:UPI00000A1BEESEG:seg::
Description
At5g06330 [Source:UniProtKB/TrEMBL;Acc:Q9FNH5]
Coordinates
chr5:-:1933890..1935840
Molecular Weight (calculated)
23131.0 Da
IEP (calculated)
9.099
GRAVY (calculated)
0.164
Length
207 amino acids
Sequence
(BLAST)
001: MTSKDCGSHD SHSSCNRKIV IWTISIILLL ILVVILLVWA ILQPSKPRFV LQDATVFNFN VSGNPPNLLT SNFQFTLSSR NPNDKIGIYY DRLDVYASYR
101: SQQITLPSPM LTTYQGHKEV NVWSPFVGGY SVPVAPYNAF YLDQDHSSGA IMLMLHLDGR VRWKVGSFIT GKYHLHVRCH ALINFGSSAA GVIVGKYMLT
201: ETCSVSV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.