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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • vacuole 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, vacuole
Any Predictor:cytosol, nucleus, plasma membrane, vacuole
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT2G35970.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 98.1 98.1
AT2G35960.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 82.46 82.86
CDY40419 Canola plasma membrane 70.14 71.15
Bra017276.1-P Field mustard plasma membrane 70.14 71.15
CDY32068 Canola plasma membrane 69.19 70.87
AT3G52470.1 Thale cress extracellular, plasma membrane 66.82 67.79
AT3G11660.1 Thale cress plasma membrane 55.92 56.46
AT5G06330.1 Thale cress plasma membrane 51.66 52.66
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 51.18 52.17
KRH72197 Soybean plasma membrane 48.82 49.76
AT3G44220.1 Thale cress plasma membrane 48.34 49.51
KRH32836 Soybean plasma membrane 48.34 48.8
KRG96252 Soybean plasma membrane 48.34 48.57
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 47.39 47.39
PGSC0003DMT400042351 Potato extracellular, plasma membrane 46.92 46.92
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 45.02 45.24
PGSC0003DMT400072342 Potato extracellular, plasma membrane 45.02 45.02
GSMUA_Achr9P08960_001 Banana plasma membrane 43.6 43.81
AT5G05657.1 Thale cress plastid 28.44 43.8
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 35.55 41.9
GSMUA_Achr10P... Banana plasma membrane 41.71 41.71
GSMUA_Achr8P34450_001 Banana plasma membrane 41.23 41.63
KRH67997 Soybean plastid 48.82 40.87
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 33.65 40.57
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 39.81 40.38
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 39.81 40.38
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 40.76 40.38
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 33.65 40.34
Os11t0157200-03 Rice plasma membrane 39.81 40.0
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 40.28 39.72
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 38.86 39.42
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 39.34 39.15
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 39.34 38.97
TraesCS5D01G133300.1 Wheat cytosol 38.39 38.94
Os12t0159600-01 Rice plastid 38.86 38.68
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 17.54 38.54
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 38.86 38.5
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 38.86 38.5
HORVU7Hr1G078320.1 Barley cytosol 39.34 38.43
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 39.34 38.43
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 38.39 38.39
Zm00001d023468_P001 Maize extracellular 38.39 38.03
Zm00001d052776_P001 Maize extracellular 38.39 38.03
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 38.39 38.03
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 38.86 37.96
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 38.86 37.96
EES16682 Sorghum golgi, plasma membrane, plastid 38.39 37.85
EES13132 Sorghum cytosol 38.39 36.99
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 36.97 36.45
EES08013 Sorghum golgi, plasma membrane, plastid 36.97 36.45
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 37.44 35.75
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 37.44 35.75
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 36.02 35.51
Zm00001d026664_P001 Maize extracellular 36.97 35.29
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 36.97 35.29
Zm00001d016733_P001 Maize extracellular, plasma membrane 31.28 35.11
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 36.49 35.0
Os04t0685400-01 Rice golgi, plasma membrane, plastid 36.02 34.55
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 36.49 34.53
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 36.97 34.36
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 34.6 33.8
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 34.12 33.33
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 34.12 33.33
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 34.12 33.33
EES12138 Sorghum extracellular, golgi, plasma membrane 34.6 33.03
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 35.07 32.89
AT5G53730.1 Thale cress plastid 32.7 32.39
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 32.7 32.09
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 32.7 32.09
Os04t0416700-01 Rice golgi, plasma membrane 33.18 31.82
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 33.65 31.7
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 32.23 31.63
EES06921 Sorghum endoplasmic reticulum 31.75 31.6
HORVU5Hr1G040160.3 Barley golgi, peroxisome 40.76 31.5
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 31.75 31.31
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 31.75 31.31
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 31.75 31.31
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 31.75 31.02
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 32.7 30.8
HORVU2Hr1G040910.1 Barley peroxisome 31.75 28.15
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 22.75 24.12
AT4G01410.1 Thale cress endoplasmic reticulum, peroxisome, plasma membrane 24.17 22.47
Protein Annotations
MapMan:35.1EntrezGene:826543ProteinID:AEE82769.1ArrayExpress:AT4G09590EnsemblPlantsGene:AT4G09590RefSeq:AT4G09590
TAIR:AT4G09590RefSeq:AT4G09590-TAIR-GEnsemblPlants:AT4G09590.1TAIR:AT4G09590.1Unigene:At.54234ProteinID:CAB78082.1
ProteinID:CAB82126.1GO:GO:0003674GO:GO:0004871GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006950GO:GO:0006952GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009506
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0046658InterPro:LEA_2Symbol:NHL22
RefSeq:NP_192697.1PFAM:PF03168PFscan:PS51257PANTHER:PTHR31415PANTHER:PTHR31415:SF2UniProt:Q9SST3
TMHMM:TMhelixUniParc:UPI000009F28FSEG:seg:::
Description
NHL22NDR1/HIN1-like 22 [Source:UniProtKB/TrEMBL;Acc:Q9SST3]
Coordinates
chr4:+:6066128..6066763
Molecular Weight (calculated)
23220.9 Da
IEP (calculated)
8.364
GRAVY (calculated)
0.035
Length
211 amino acids
Sequence
(BLAST)
001: MTTKECGNHG GGGGGGGTAC RICGAIIGFI IIVLMTIFLV WIILQPKNPE FILQDTTVYA FNLSQPNLLT SKFQITIASR NRNSNIGIYY DHLHAYASYR
101: NQQITLASDL PPTYQRHKED SVWSPLLYGN QVPIAPFNAV ALGDEQNSGV FTLTICVDGQ VRWKVGTLTI GNYHLHVRCQ AFINQADKAA GVHVGENTVK
201: YTLINKCSVN F
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.