Factsheet for TraesCS2A01G583600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

golgi 1
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, golgi, mitochondrion, plasma membrane
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G596200.1	Wheat	cytosol, golgi, plasma membrane	97.74	97.74
TraesCS2B01G603000.1	Wheat	cytosol, golgi, plasma membrane	96.38	96.38
HORVU2Hr1G123370.1	Barley	cytosol, golgi, plasma membrane	95.48	95.91
EES13132	Sorghum	cytosol	82.81	83.56
Zm00001d026664_P001	Maize	extracellular	81.9	81.9
Os04t0685400-01	Rice	golgi, plasma membrane, plastid	76.92	77.27
TraesCS7A01G327200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	61.99	63.43
GSMUA_Achr9P29670_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	44.34	55.68
GSMUA_Achr8P34450_001	Banana	plasma membrane	49.77	52.63
GSMUA_Achr10P...	Banana	plasma membrane	50.23	52.61
TraesCS5A01G125800.1	Wheat	golgi, plasma membrane, plastid	49.32	52.4
TraesCS4A01G199700.1	Wheat	golgi, plasma membrane, plastid	49.32	51.17
GSMUA_Achr6P19500_001	Banana	endoplasmic reticulum, plasma membrane	47.96	50.24
PGSC0003DMT400015090	Potato	plasma membrane	47.06	50.0
GSMUA_Achr11P...	Banana	cytosol, extracellular, mitochondrion, peroxisome	40.27	49.72
Solyc06g074040.1.1	Tomato	plasma membrane	46.61	49.52
VIT_06s0080g01200.t01	Wine grape	plasma membrane	45.7	48.56
GSMUA_Achr7P03290_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	45.7	47.42
PGSC0003DMT400050538	Potato	plasma membrane	43.89	46.41
Solyc11g068890.1.1	Tomato	plasma membrane	43.89	46.41
TraesCS5A01G484900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	44.8	46.26
KRH26671	Soybean	plasma membrane	45.7	45.7
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	43.89	45.33
Bra035001.1-P	Field mustard	plasma membrane	42.08	45.15
CDY69513	Canola	plasma membrane	42.08	45.15
CDY08687	Canola	plasma membrane	42.08	45.15
TraesCS2A01G205300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	43.89	45.12
AT3G44220.1	Thale cress	plasma membrane	41.63	44.66
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	42.53	44.13
TraesCS2A01G297700.1	Wheat	extracellular, plasma membrane	42.53	43.52
Bra002396.1-P	Field mustard	plasma membrane	39.82	42.51
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	39.82	42.51
KRH22643	Soybean	plasma membrane	41.63	42.2
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	39.82	41.9
TraesCS5A01G125600.1	Wheat	cytosol, peroxisome, plasma membrane	42.08	41.7
CDX92375	Canola	plasma membrane	38.91	41.55
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	39.37	41.23
CDX98590	Canola	plasma membrane	38.46	41.06
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	38.91	40.76
AT5G06330.1	Thale cress	plasma membrane	38.01	40.58
Bra012801.1-P	Field mustard	plasma membrane	38.01	40.38
CDY72430	Canola	cytosol	38.01	40.38
CDX90600	Canola	plasma membrane	38.01	40.38
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	38.46	40.28
AT3G11660.1	Thale cress	plasma membrane	38.01	40.19
KRH32836	Soybean	plasma membrane	38.01	40.19
CDY29084	Canola	mitochondrion	31.22	40.12
KRH72197	Soybean	plasma membrane	37.56	40.1
Bra033428.1-P	Field mustard	cytosol	37.56	39.9
Bra038671.1-P	Field mustard	plasma membrane	38.01	39.81
CDY35671	Canola	plasma membrane	37.56	39.71
AT2G35960.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	37.56	39.52
KRG96252	Soybean	plasma membrane	37.56	39.52
AT3G52470.1	Thale cress	extracellular, plasma membrane	37.1	39.42
CDY68967	Canola	cytosol	37.1	39.42
CDY69198	Canola	cytosol	37.1	39.42
Bra006927.1-P	Field mustard	cytosol	37.1	39.42
CDY32068	Canola	plasma membrane	36.65	39.32
Bra034822.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid	37.56	39.15
CDY01043	Canola	mitochondrion	37.56	39.15
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	37.56	39.15
Bra017276.1-P	Field mustard	plasma membrane	35.75	37.98
CDY40419	Canola	plasma membrane	35.75	37.98
CDY09123	Canola	plasma membrane	35.75	37.8
AT2G35970.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	35.75	37.44
AT4G09590.1	Thale cress	cytosol, plasma membrane, vacuole	35.75	37.44
Bra020177.1-P	Field mustard	plasma membrane	35.29	37.32
CDY55755	Canola	plasma membrane	34.84	36.15
Bra005892.1-P	Field mustard	plasma membrane	34.39	35.68
CDX81001	Canola	plastid	33.94	34.88
KRH67997	Soybean	plastid	39.37	34.52
AT5G05657.1	Thale cress	plastid	21.27	34.31
TraesCS5A01G320200.1	Wheat	cytosol, peroxisome, vacuole	29.41	28.89
CDX95339	Canola	plasma membrane	37.1	27.52
TraesCS6A01G349800.1	Wheat	endoplasmic reticulum	24.89	26.96
TraesCS7A01G440300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	24.43	26.73
TraesCS1A01G232200.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	29.41	25.59
TraesCS5A01G098600.1	Wheat	cytosol, endoplasmic reticulum, nucleus	23.98	25.24

Protein Annotations

EnsemblPlants:TraesCS2A01G583600.1	EnsemblPlantsGene:TraesCS2A01G583600	InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF8	PFAM:PF03168
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2A:-:775378492..775379157

Molecular Weight (calculated)

24394.7 Da

IEP (calculated)

8.696

GRAVY (calculated)

0.076

Length

221 amino acids

Sequence
(BLAST)

001: MAVKDCGGHK GGGCECHRRR LYRKCCGALL ALVILALFII LIVYLVLRPH KPRFYLQDLA VLCLNVTPPT SAYLFTTMQA TVAARNPNDR VGVYYDEADM
101: YAEYKGVPIT VPTRLPVAYQ GHRDQSVWSP YLRSMDSVVL PPQLAIALAQ DETAGYVLVD VKVDGQVRWK VGTWISGHYH LRVNCPALIR VNEGKGSYGA
201: TTGGGPDYFR FQQAAACAVD V

Best Arabidopsis Sequence Match ( AT3G11660.1 )
(BLAST)

001: MKDCENHGHS RRKLIRRIFW SIIFVLFIIF LTILLIWAIL QPSKPRFILQ DATVYAFNVS GNPPNLLTSN FQITLSSRNP NNKIGIYYDR LDVYATYRSQ
101: QITFPTSIPP TYQGHKDVDI WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY INFGNKANGV IVGDNAVKYT
201: FTTSCSVSV

Arabidopsis Description

NHL1NDR1/HIN1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRN0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.