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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • plasma membrane 3
  • golgi 2
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:plasma membrane
Plant-mPloc:golgi, plastid
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92375 Canola plasma membrane 98.55 98.55
CDX98590 Canola plasma membrane 97.1 97.1
Bra020177.1-P Field mustard plasma membrane 83.09 82.3
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 72.95 71.9
Bra035001.1-P Field mustard plasma membrane 68.6 68.93
VIT_06s0080g01200.t01 Wine grape plasma membrane 52.17 51.92
PGSC0003DMT400015090 Potato plasma membrane 51.21 50.96
Solyc06g074040.1.1 Tomato plasma membrane 51.21 50.96
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 40.58 48.0
PGSC0003DMT400050538 Potato plasma membrane 48.31 47.85
Os11t0157200-03 Rice plasma membrane 48.31 47.62
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 48.79 47.42
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 47.34 47.12
Bra006927.1-P Field mustard cytosol 47.34 47.12
Solyc11g068890.1.1 Tomato plasma membrane 47.34 46.89
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 21.74 46.88
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 48.31 46.73
Bra034822.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid 47.83 46.7
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 46.86 46.63
Bra012801.1-P Field mustard plasma membrane 46.86 46.63
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 39.61 46.59
KRH22643 Soybean plasma membrane 48.79 46.33
Bra038671.1-P Field mustard plasma membrane 46.86 45.97
Zm00001d016733_P001 Maize extracellular, plasma membrane 41.55 45.74
GSMUA_Achr9P08960_001 Banana plasma membrane 46.38 45.71
KRH26671 Soybean plasma membrane 48.79 45.7
Bra033428.1-P Field mustard cytosol 45.89 45.67
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 46.86 45.54
GSMUA_Achr10P... Banana plasma membrane 46.38 45.5
Bra017276.1-P Field mustard plasma membrane 45.41 45.19
TraesCS5D01G133300.1 Wheat cytosol 45.41 45.19
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 45.89 44.81
EES16682 Sorghum golgi, plasma membrane, plastid 45.89 44.39
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 44.44 44.23
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 45.41 44.13
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 45.41 44.13
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 45.41 44.13
Zm00001d052776_P001 Maize extracellular 45.41 44.13
Zm00001d023468_P001 Maize extracellular 44.93 43.66
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 44.44 43.6
EES08013 Sorghum golgi, plasma membrane, plastid 44.44 42.99
Os12t0159600-01 Rice plastid 43.96 42.92
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 43.96 42.72
GSMUA_Achr8P34450_001 Banana plasma membrane 43.0 42.58
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 36.72 42.46
EES06921 Sorghum endoplasmic reticulum 43.48 42.45
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 43.96 42.33
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 43.96 42.33
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 43.48 41.86
EES12138 Sorghum extracellular, golgi, plasma membrane 44.44 41.63
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 43.0 41.59
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 43.0 41.59
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 43.0 41.59
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 42.03 40.65
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 42.03 40.28
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 42.03 40.28
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 42.03 40.28
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 42.03 40.28
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 42.03 40.28
Os04t0416700-01 Rice golgi, plasma membrane 42.51 40.0
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 43.48 40.0
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 42.51 39.82
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 42.51 39.82
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 43.0 39.73
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 42.51 39.46
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 42.03 39.37
HORVU7Hr1G078320.1 Barley cytosol 41.06 39.35
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 42.51 39.29
Os04t0685400-01 Rice golgi, plasma membrane, plastid 41.55 39.09
HORVU2Hr1G040910.1 Barley peroxisome 44.93 39.08
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 40.58 38.89
EES13132 Sorghum cytosol 41.06 38.81
Zm00001d026664_P001 Maize extracellular 41.06 38.46
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 40.1 38.43
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 40.1 38.43
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 40.58 38.18
Bra005892.1-P Field mustard plasma membrane 39.13 38.03
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 39.13 37.85
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 38.65 37.38
HORVU5Hr1G040160.3 Barley golgi, peroxisome 47.83 36.26
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 37.2 33.92
Bra022668.1-P Field mustard endoplasmic reticulum, nucleus, plasma membrane 34.3 33.33
Bra003039.1-P Field mustard plastid 34.3 33.33
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 24.64 25.63
Bra037412.1-P Field mustard cytosol, peroxisome, plasma membrane 27.05 24.24
Bra000927.1-P Field mustard cytosol, peroxisome, plasma membrane 26.57 24.02
Protein Annotations
EnsemblPlants:Bra002396.1EnsemblPlants:Bra002396.1-PEnsemblPlantsGene:Bra002396GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:LEA_2PANTHER:PTHR31415PANTHER:PTHR31415:SF17PFAM:PF03168TMHMM:TMhelixUniParc:UPI0002544687
UniProt:M4CDW5MapMan:35.1::::
Description
AT5G22200 (E=2e-082) | harpin-induced family protein / HIN1 family protein / harpin-responsive family protein
Coordinates
chrA10:-:9844970..9845894
Molecular Weight (calculated)
23014.0 Da
IEP (calculated)
7.849
GRAVY (calculated)
0.213
Length
207 amino acids
Sequence
(BLAST)
001: MTGKECKFDY RKYAEAATRR LVYGFLGLVA TVAVVIFFVW AILHPHKPRF VLQDVTIYEF NISQPNLLSS NLQVTLSSRN PNDKIGVFYD RLDIYASYRN
101: QEVTLANLLP ETYQGHLEVT VWSPVLIGSA VPVDPYLTPA LKEDINAGMV LLNIKIDGCV KWKVGSWVSG CYRLLVNCPA FIPFSGQVVG GGPAIKDQLA
201: QQCAVDV
Best Arabidopsis Sequence Match ( AT3G44220.1 )
(BLAST)
001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV
Arabidopsis Description
At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.