Factsheet for Bra035001.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
cytosol 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69513	Canola	plasma membrane	100.0	100.0
CDY08687	Canola	plasma membrane	99.51	99.51
AT3G44220.1	Thale cress	plasma membrane	94.17	94.17
Bra002396.1-P	Field mustard	plasma membrane	68.93	68.6
Bra020177.1-P	Field mustard	plasma membrane	66.02	65.07
PGSC0003DMT400015090	Potato	plasma membrane	59.71	59.13
Solyc06g074040.1.1	Tomato	plasma membrane	59.71	59.13
VIT_06s0080g01200.t01	Wine grape	plasma membrane	59.71	59.13
Solyc11g068890.1.1	Tomato	plasma membrane	56.8	55.98
PGSC0003DMT400050538	Potato	plasma membrane	56.8	55.98
Bra012801.1-P	Field mustard	plasma membrane	54.85	54.33
Bra006927.1-P	Field mustard	cytosol	54.85	54.33
Bra038671.1-P	Field mustard	plasma membrane	54.85	53.55
KRH26671	Soybean	plasma membrane	56.8	52.94
Bra033428.1-P	Field mustard	cytosol	53.4	52.88
GSMUA_Achr9P29670_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	44.17	51.7
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	53.4	51.64
Bra034822.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid	52.91	51.42
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	53.4	51.4
Bra017276.1-P	Field mustard	plasma membrane	51.46	50.96
GSMUA_Achr10P...	Banana	plasma membrane	51.46	50.24
GSMUA_Achr9P08960_001	Banana	plasma membrane	50.0	49.05
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	22.82	48.96
KRH22643	Soybean	plasma membrane	51.46	48.62
GSMUA_Achr6P19500_001	Banana	endoplasmic reticulum, plasma membrane	49.51	48.34
TraesCS5B01G125000.1	Wheat	cytosol, extracellular, plasma membrane	40.78	48.0
TraesCS5A01G125800.1	Wheat	golgi, plasma membrane, plastid	47.09	46.63
TraesCS5D01G133400.1	Wheat	golgi, plasma membrane, plastid	46.6	46.15
GSMUA_Achr11P...	Banana	cytosol, extracellular, mitochondrion, peroxisome	39.81	45.81
Os12t0159600-01	Rice	plastid	47.09	45.75
Os11t0157200-03	Rice	plasma membrane	46.6	45.71
TraesCS5D01G133300.1	Wheat	cytosol	46.12	45.67
GSMUA_Achr7P03290_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	47.09	45.54
EES16682	Sorghum	golgi, plasma membrane, plastid	47.09	45.33
TraesCS7A01G327200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	47.09	44.91
TraesCS7D01G323900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	47.09	44.91
HORVU7Hr1G078320.1	Barley	cytosol	47.09	44.91
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	46.6	44.86
Zm00001d016733_P001	Maize	extracellular, plasma membrane	40.78	44.68
GSMUA_Achr8P34450_001	Banana	plasma membrane	45.15	44.5
TraesCS7B01G227800.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	46.6	44.44
TraesCS5B01G124900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	44.66	44.23
TraesCS4D01G113300.1	Wheat	peroxisome, plasma membrane, plastid	45.15	43.66
HORVU4Hr1G021190.1	Barley	golgi, plasma membrane, plastid	45.15	43.66
Zm00001d023468_P001	Maize	extracellular	45.15	43.66
Zm00001d041927_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	44.66	43.4
Zm00001d052776_P001	Maize	extracellular	44.66	43.19
TraesCS4B01G115700.1	Wheat	peroxisome, plasma membrane, plastid	44.66	43.19
TraesCS4A01G199700.1	Wheat	golgi, plasma membrane, plastid	44.66	43.19
TraesCS2B01G603000.1	Wheat	cytosol, golgi, plasma membrane	46.12	42.99
Os04t0685400-01	Rice	golgi, plasma membrane, plastid	45.63	42.73
Zm00001d026664_P001	Maize	extracellular	45.63	42.53
EES08013	Sorghum	golgi, plasma membrane, plastid	44.17	42.52
Zm00001d034977_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	44.17	42.52
EES14353	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	44.17	42.52
Bra005892.1-P	Field mustard	plasma membrane	43.69	42.25
TraesCS2A01G583600.1	Wheat	cytosol, golgi, plasma membrane	45.15	42.08
EES13132	Sorghum	cytosol	44.66	42.01
TraesCS2D01G596200.1	Wheat	cytosol, golgi, plasma membrane	44.66	41.63
EES06921	Sorghum	endoplasmic reticulum	42.72	41.51
TraesCS2D01G210700.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	43.2	41.4
TraesCS2B01G232700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	43.2	41.4
TraesCS2A01G205300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	43.2	41.4
HORVU2Hr1G123370.1	Barley	cytosol, golgi, plasma membrane	43.69	40.91
Os08t0102700-01	Rice	cytosol, peroxisome, plasma membrane	44.17	40.09
TraesCS5A01G125600.1	Wheat	cytosol, peroxisome, plasma membrane	42.23	39.01
TraesCS2D01G295700.1	Wheat	extracellular, plasma membrane	40.78	38.89
TraesCS2B01G313900.1	Wheat	extracellular, plasma membrane	40.78	38.89
HORVU2Hr1G073830.1	Barley	extracellular, plasma membrane	40.78	38.89
TraesCS2A01G297700.1	Wheat	extracellular, plasma membrane	40.78	38.89
Os02t0538700-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	42.23	38.84
HORVU5Hr1G114220.1	Barley	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	40.29	38.43
TraesCS5B01G498200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	39.81	38.32
TraesCS5A01G484900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	39.81	38.32
TraesCS5D01G498400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	39.81	38.32
EES12138	Sorghum	extracellular, golgi, plasma membrane	40.78	38.01
HORVU2Hr1G040910.1	Barley	peroxisome	43.2	37.4
Os04t0416700-01	Rice	golgi, plasma membrane	39.81	37.27
Zm00001d003751_P001	Maize	extracellular, golgi, plasma membrane	40.29	36.89
Zm00001d025371_P001	Maize	extracellular, golgi, plasma membrane	39.81	36.61
HORVU5Hr1G040160.3	Barley	golgi, peroxisome	47.09	35.53
Bra022668.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	36.41	35.21
Bra003039.1-P	Field mustard	plastid	35.44	34.27
HORVU2Hr1G066420.1	Barley	mitochondrion, plastid	26.21	27.14
Bra037412.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.64	25.54
Bra000927.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.67	24.89

Protein Annotations

EnsemblPlants:Bra035001.1	EnsemblPlants:Bra035001.1-P	EnsemblPlantsGene:Bra035001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF17	PFAM:PF03168	SEG:seg	TMHMM:TMhelix
UniParc:UPI000253E5CB	UniProt:M4F1Q4	MapMan:35.1	:	:	:

Description

AT3G44220 (E=4e-096) | harpin-induced family protein / HIN1 family protein / harpin-responsive family protein

Coordinates

chrScaffold000100:+:781233..782355

Molecular Weight (calculated)

23149.9 Da

IEP (calculated)

7.659

GRAVY (calculated)

0.056

Length

206 amino acids

Sequence
(BLAST)

001: MTEKECEHHH DEDEKMRRRI GAAVLGLLAA GLFVVFLVWA ILHPHGPRFV LQDATIYAFN ISEPNFLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTV WSPFLYGTSV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWISGR YRLHVNCPAY ITLAGHFSGE GPAVKYQLVQ
201: RCGVDV

Best Arabidopsis Sequence Match ( AT3G44220.1 )
(BLAST)

001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV

Arabidopsis Description

At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.