Factsheet for TraesCS2A01G205300.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, endoplasmic reticulum, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G232700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	97.67	97.67
TraesCS2D01G210700.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	96.74	96.74
HORVU2Hr1G040910.1	Barley	peroxisome	94.88	85.71
TraesCS5A01G484900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	82.79	83.18
Os02t0538700-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	81.86	78.57
Zm00001d016733_P001	Maize	extracellular, plasma membrane	67.91	77.66
EES06921	Sorghum	endoplasmic reticulum	73.49	74.53
TraesCS2A01G297700.1	Wheat	extracellular, plasma membrane	65.12	64.81
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	24.65	55.21
TraesCS5A01G125800.1	Wheat	golgi, plasma membrane, plastid	51.63	53.37
TraesCS4A01G199700.1	Wheat	golgi, plasma membrane, plastid	49.77	50.23
GSMUA_Achr9P08960_001	Banana	plasma membrane	47.44	48.57
PGSC0003DMT400015090	Potato	plasma membrane	43.72	45.19
Solyc06g074040.1.1	Tomato	plasma membrane	42.79	44.23
TraesCS2A01G583600.1	Wheat	cytosol, golgi, plasma membrane	45.12	43.89
AT3G44220.1	Thale cress	plasma membrane	41.86	43.69
TraesCS5A01G125600.1	Wheat	cytosol, peroxisome, plasma membrane	45.12	43.5
Bra002396.1-P	Field mustard	plasma membrane	41.86	43.48
CDX92375	Canola	plasma membrane	41.86	43.48
Bra035001.1-P	Field mustard	plasma membrane	41.4	43.2
CDY69513	Canola	plasma membrane	41.4	43.2
CDY08687	Canola	plasma membrane	41.4	43.2
CDX98590	Canola	plasma membrane	41.4	43.0
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	41.86	42.86
VIT_06s0080g01200.t01	Wine grape	plasma membrane	41.4	42.79
Solyc11g068890.1.1	Tomato	plasma membrane	40.47	41.63
CDY29084	Canola	mitochondrion	33.02	41.28
TraesCS7A01G327200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	41.4	41.2
PGSC0003DMT400050538	Potato	plasma membrane	40.0	41.15
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	39.07	40.58
Bra020177.1-P	Field mustard	plasma membrane	39.07	40.19
KRH32836	Soybean	plasma membrane	39.07	40.19
CDY09123	Canola	plasma membrane	39.07	40.19
KRG96252	Soybean	plasma membrane	38.6	39.52
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	39.07	39.44
Bra006927.1-P	Field mustard	cytosol	38.14	39.42
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	39.07	39.25
CDY68967	Canola	cytosol	37.67	38.94
CDY69198	Canola	cytosol	37.67	38.94
CDX90600	Canola	plasma membrane	37.67	38.94
KRH26671	Soybean	plasma membrane	40.0	38.91
CDY35671	Canola	plasma membrane	37.67	38.76
AT3G11660.1	Thale cress	plasma membrane	37.67	38.76
Bra012801.1-P	Field mustard	plasma membrane	37.21	38.46
CDY72430	Canola	cytosol	36.74	37.98
Bra038671.1-P	Field mustard	plasma membrane	37.21	37.91
KRH72197	Soybean	plasma membrane	36.28	37.68
Bra033428.1-P	Field mustard	cytosol	36.28	37.5
AT3G52470.1	Thale cress	extracellular, plasma membrane	36.28	37.5
AT5G06330.1	Thale cress	plasma membrane	35.81	37.2
KRH22643	Soybean	plasma membrane	37.67	37.16
CDY32068	Canola	plasma membrane	35.35	36.89
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	35.35	36.02
CDY40419	Canola	plasma membrane	34.42	35.58
Bra017276.1-P	Field mustard	plasma membrane	34.42	35.58
Bra034822.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid	34.88	35.38
AT2G35960.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	34.42	35.24
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	34.42	35.07
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	34.42	35.07
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	34.42	34.91
CDX81001	Canola	plastid	34.88	34.88
CDY01043	Canola	mitochondrion	33.95	34.43
Bra005892.1-P	Field mustard	plasma membrane	33.95	34.27
CDY55755	Canola	plasma membrane	33.49	33.8
AT2G35970.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	33.02	33.65
KRH67997	Soybean	plastid	39.07	33.33
AT4G09590.1	Thale cress	cytosol, plasma membrane, vacuole	32.09	32.7
TraesCS5A01G320200.1	Wheat	cytosol, peroxisome, vacuole	33.02	31.56
AT5G05657.1	Thale cress	plastid	18.6	29.2
CDX95339	Canola	plasma membrane	36.28	26.17
TraesCS1A01G232200.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	28.84	24.41
TraesCS6A01G349800.1	Wheat	endoplasmic reticulum	20.93	22.06
TraesCS5A01G098600.1	Wheat	cytosol, endoplasmic reticulum, nucleus	20.47	20.95
TraesCS7A01G440300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	19.53	20.79

Protein Annotations

EnsemblPlants:TraesCS2A01G205300.1	EnsemblPlantsGene:TraesCS2A01G205300	InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF15	PFAM:PF03168
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2A:-:183207342..183208195

Molecular Weight (calculated)

23122.1 Da

IEP (calculated)

8.934

GRAVY (calculated)

0.151

Length

215 amino acids

Sequence
(BLAST)

001: MNKEKHHTYE NHLRRCCNGF AACLLALVVV VAFIALVVYL ALRPTKPSFY LQDLQLHSIN LGDPSLSATA QVTLASRNPN DRVGIFYRRL DVFVTYRDEP
101: VTVPISLPPM YQGHRDVTIW SPVLSGESVP VAGYVAEAMK QDIASGYVSL QVKIDGRVKW KVGTWVSGSY HLFVSCPAML AAGPGGMPLG GGPNGTGGAV
201: ASLKFTQPTG CTVGT

Best Arabidopsis Sequence Match ( AT5G22200.1 )
(BLAST)

001: MTGRYCDQHN GYEERRMRMM MRRIAWACLG LIVAVAFVVF LVWAILHPHG PRFVLQDVTI NDFNVSQPNF LSSNLQVTVS SRNPNDKIGI FYDRLDIYVT
101: YRNQEVTLAR LLPSTYQGHL EVTVWSPFLI GSAVPVAPYL SSALNEDLFA GLVLLNIKID GWVRWKVGSW VSGSYRLHVN CPAFITVTGK LTGTGPAIKY
201: QLVQRCAVDV

Arabidopsis Description

Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:UniProtKB/TrEMBL;Acc:Q9C568]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.