Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY09123 Canola plasma membrane 95.22 95.22
CDX92375 Canola plasma membrane 83.25 84.06
CDX98590 Canola plasma membrane 82.78 83.57
CDY69513 Canola plasma membrane 66.99 67.96
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 67.94 67.62
CDY08687 Canola plasma membrane 66.51 67.48
VIT_06s0080g01200.t01 Wine grape plasma membrane 51.2 51.44
Solyc06g074040.1.1 Tomato plasma membrane 50.24 50.48
PGSC0003DMT400015090 Potato plasma membrane 49.76 50.0
CDX90600 Canola plasma membrane 47.37 47.6
CDY69198 Canola cytosol 47.37 47.6
CDY68967 Canola cytosol 47.37 47.6
CDY29084 Canola mitochondrion 38.76 47.09
CDY72430 Canola cytosol 46.41 46.63
CDY40419 Canola plasma membrane 46.41 46.63
CDY32068 Canola plasma membrane 45.93 46.6
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 47.37 46.48
Solyc11g068890.1.1 Tomato plasma membrane 46.41 46.41
PGSC0003DMT400050538 Potato plasma membrane 45.93 45.93
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 46.89 45.79
CDY01043 Canola mitochondrion 45.45 44.81
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 44.98 44.34
KRH26671 Soybean plasma membrane 46.41 43.89
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 36.36 43.43
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 36.36 43.18
KRH22643 Soybean plasma membrane 44.98 43.12
Os11t0157200-03 Rice plasma membrane 43.06 42.86
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 19.62 42.71
GSMUA_Achr10P... Banana plasma membrane 43.06 42.65
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 41.63 41.83
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 42.58 41.78
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 42.11 41.71
Zm00001d016733_P001 Maize extracellular, plasma membrane 37.32 41.49
GSMUA_Achr9P08960_001 Banana plasma membrane 41.63 41.43
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 41.15 41.35
TraesCS5D01G133300.1 Wheat cytosol 40.67 40.87
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 41.63 40.85
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 41.15 40.38
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 41.15 40.38
GSMUA_Achr8P34450_001 Banana plasma membrane 40.19 40.19
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 41.15 40.19
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 40.67 39.91
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 39.71 39.9
EES16682 Sorghum golgi, plasma membrane, plastid 40.67 39.72
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 33.97 39.66
Zm00001d052776_P001 Maize extracellular 40.19 39.44
Os12t0159600-01 Rice plastid 39.71 39.15
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 39.71 39.15
EES12138 Sorghum extracellular, golgi, plasma membrane 40.19 38.01
EES06921 Sorghum endoplasmic reticulum 38.28 37.74
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 38.76 37.67
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 38.76 37.67
Zm00001d023468_P001 Maize extracellular 38.28 37.56
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 39.71 37.56
EES08013 Sorghum golgi, plasma membrane, plastid 38.28 37.38
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 39.23 37.1
CDY55755 Canola plasma membrane 37.8 37.09
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 37.8 36.74
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 38.76 36.65
Zm00001d026664_P001 Maize extracellular 38.76 36.65
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 37.8 36.57
HORVU7Hr1G078320.1 Barley cytosol 37.8 36.57
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 37.8 36.57
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 37.8 36.57
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 37.8 36.57
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 37.8 36.57
EES13132 Sorghum cytosol 38.28 36.53
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 39.23 36.44
Os04t0685400-01 Rice golgi, plasma membrane, plastid 38.28 36.36
CDX81001 Canola plastid 37.32 36.28
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 37.32 36.11
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 37.32 36.11
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 36.84 35.98
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 36.84 35.98
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 36.84 35.98
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 37.8 35.91
Os04t0416700-01 Rice golgi, plasma membrane 37.8 35.91
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 38.28 35.71
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 36.84 35.65
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 36.36 35.51
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 37.8 35.43
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 35.89 35.05
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 36.84 34.38
HORVU2Hr1G040910.1 Barley peroxisome 38.76 34.03
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 35.89 33.04
CDY28821 Canola endoplasmic reticulum, nucleus, plasma membrane 33.01 32.39
CDY51789 Canola endoplasmic reticulum, nucleus, plasma membrane 33.01 32.39
HORVU5Hr1G040160.3 Barley golgi, peroxisome 42.11 32.23
CDY20226 Canola endoplasmic reticulum, nucleus, plasma membrane 32.54 31.92
CDX95339 Canola plasma membrane 45.45 31.88
CDY14357 Canola plastid 32.06 31.46
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 22.49 23.62
CDY07145 Canola cytosol, peroxisome, plasma membrane 24.88 22.41
CDY51712 Canola cytosol, peroxisome, plasma membrane 24.4 22.08
CDX91852 Canola cytosol, peroxisome, plasma membrane 23.92 21.83
CDX74380 Canola cytosol, peroxisome, plasma membrane 23.92 21.83
Protein Annotations
EnsemblPlants:CDY35671EnsemblPlantsGene:GSBRNA2T00059072001GO:A0A078HD84GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:LEA_2PANTHER:PTHR31415PANTHER:PTHR31415:SF17PFAM:PF03168ProteinID:CDY35671ProteinID:CDY35671.1
SEG:segTMHMM:TMhelixUniParc:UPI0004EE710EUniProt:A0A078HD84MapMan:35.1:
Description
BnaC02g09370DBnaC02g09370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HD84]
Coordinates
chrLK032358:+:21280..22125
Molecular Weight (calculated)
23139.1 Da
IEP (calculated)
5.987
GRAVY (calculated)
0.222
Length
209 amino acids
Sequence
(BLAST)
001: MAEKEKKCEI DYSKYVDAAT RRIVYGCIGL VITVAVVVFL VWAILHPHKM DFVLQDVTIY EFNISQPNLL TSNLQVTVSS HNPNDKIGIL YDRLDIYASY
101: RNQQVTLAHL MPETYQGHLE VTVWSPVLTG TAVSVEPYLT PALNEDINAG MVLLNIKIDG CVKFKVGTWV SGCYRLLVNC PASIPFSGQF AGTGPAIKDQ
201: LAQQCAVDV
Best Arabidopsis Sequence Match ( AT3G44220.1 )
(BLAST)
001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV
Arabidopsis Description
At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.