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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:
  • nucleus 1
  • golgi 2
  • plastid 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, plastid
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:golgi
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES13132 Sorghum cytosol 81.82 82.19
Zm00001d026664_P001 Maize extracellular 82.27 81.9
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 79.55 79.19
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 78.64 78.64
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 78.18 77.83
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 77.27 76.92
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 63.64 61.67
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 43.64 54.55
GSMUA_Achr10P... Banana plasma membrane 51.36 53.55
Os12t0159600-01 Rice plastid 49.09 50.94
GSMUA_Achr8P34450_001 Banana plasma membrane 48.18 50.72
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 47.73 49.76
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 39.55 48.6
PGSC0003DMT400015090 Potato plasma membrane 45.91 48.56
Os11t0157200-03 Rice plasma membrane 45.91 48.1
Solyc06g074040.1.1 Tomato plasma membrane 45.0 47.6
PGSC0003DMT400050538 Potato plasma membrane 43.64 45.93
CDY08687 Canola plasma membrane 42.73 45.63
CDY69513 Canola plasma membrane 42.73 45.63
Bra035001.1-P Field mustard plasma membrane 42.73 45.63
Solyc11g068890.1.1 Tomato plasma membrane 43.18 45.45
VIT_06s0080g01200.t01 Wine grape plasma membrane 42.73 45.19
AT3G44220.1 Thale cress plasma membrane 41.82 44.66
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 43.18 44.6
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 41.36 43.33
Bra012801.1-P Field mustard plasma membrane 40.45 42.79
CDX90600 Canola plasma membrane 40.45 42.79
CDY72430 Canola cytosol 40.45 42.79
CDY29084 Canola mitochondrion 33.18 42.44
Bra033428.1-P Field mustard cytosol 40.0 42.31
AT3G52470.1 Thale cress extracellular, plasma membrane 40.0 42.31
AT3G11660.1 Thale cress plasma membrane 40.0 42.11
KRH26671 Soybean plasma membrane 42.27 42.08
CDY68967 Canola cytosol 39.55 41.83
CDY69198 Canola cytosol 39.55 41.83
Bra006927.1-P Field mustard cytosol 39.55 41.83
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 40.45 41.59
Bra002396.1-P Field mustard plasma membrane 39.09 41.55
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 42.27 41.52
Os04t0416700-01 Rice golgi, plasma membrane 41.36 41.36
CDX92375 Canola plasma membrane 38.64 41.06
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 38.64 41.06
Bra038671.1-P Field mustard plasma membrane 39.09 40.76
AT5G06330.1 Thale cress plasma membrane 38.18 40.58
KRH72197 Soybean plasma membrane 38.18 40.58
CDY32068 Canola plasma membrane 37.73 40.29
KRH32836 Soybean plasma membrane 38.18 40.19
CDX98590 Canola plasma membrane 37.73 40.1
CDY01043 Canola mitochondrion 38.64 40.09
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 38.64 40.09
Bra034822.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid 38.64 40.09
AT2G35960.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 38.18 40.0
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 38.64 39.91
PGSC0003DMT400072342 Potato extracellular, plasma membrane 38.18 39.81
KRG96252 Soybean plasma membrane 37.73 39.52
CDY40419 Canola plasma membrane 37.27 39.42
Bra017276.1-P Field mustard plasma membrane 37.27 39.42
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 37.27 38.86
PGSC0003DMT400042351 Potato extracellular, plasma membrane 37.27 38.86
KRH22643 Soybean plasma membrane 38.18 38.53
CDY35671 Canola plasma membrane 36.36 38.28
CDY09123 Canola plasma membrane 35.45 37.32
Bra020177.1-P Field mustard plasma membrane 34.55 36.36
AT2G35970.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 34.55 36.02
AT4G09590.1 Thale cress cytosol, plasma membrane, vacuole 34.55 36.02
KRH67997 Soybean plastid 40.0 34.92
CDX81001 Canola plastid 34.09 34.88
CDY55755 Canola plasma membrane 33.64 34.74
AT5G05657.1 Thale cress plastid 21.36 34.31
Bra005892.1-P Field mustard plasma membrane 33.18 34.27
CDX95339 Canola plasma membrane 39.55 29.19
Os09t0532200-00 Rice plastid 25.45 25.69
Os02t0100600-01 Rice endoplasmic reticulum, golgi, nucleus 23.64 24.3
Os05t0367900-01 Rice plastid 28.18 23.85
Protein Annotations
MapMan:35.1EntrezGene:4337462EMBL:AK061257EMBL:AK069353EMBL:AK103610ProteinID:BAF16232.1
ProteinID:BAS91726.1ProteinID:CAE03458.1GO:GO:0003674GO:GO:0004871GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006950GO:GO:0006952GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0009506GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0046658InterPro:LEA_2
EnsemblPlantsGene:Os04g0685400EnsemblPlants:Os04t0685400-01PFAM:PF03168PANTHER:PTHR31415PANTHER:PTHR31415:SF8UniProt:Q7XPU0
TMHMM:TMhelixUniParc:UPI00001B179BRefSeq:XP_015637178.1SEG:seg::
Description
Harpin-induced 1 domain containing protein. (Os04t0685400-01);Harpin-induced 1 domain containing protein. (Os04t0685400-02)
Coordinates
chr4:-:35011005..35012423
Molecular Weight (calculated)
24533.6 Da
IEP (calculated)
7.789
GRAVY (calculated)
0.126
Length
220 amino acids
Sequence
(BLAST)
001: MSVIKDCGGH KGCECEKEKV HRRLCWALVA LVLLTLFIVL VVWLALRPHK PRFYLQDLSV LCLNVTPPAS AYLFTTMQAT VAARNDNGRV GVYYDKVDVY
101: AQYKDVAITV PTRLPVEYQG HYDQSVWSPF LQSLDHVVLP PNLAVALAQD ETAGYVLVDI RLDGWVRWKV GTWISGHYHL RVNCPALLTV NDGKGSYGVN
201: YGGGDGYFRF QQAAACAVDV
Best Arabidopsis Sequence Match ( AT3G44220.1 )
(BLAST)
001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV
Arabidopsis Description
At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.