Factsheet for Os05t0367900-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G245500.1	Wheat	cytosol	70.0	71.94
TraesCS1A01G232200.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	70.0	71.65
HORVU1Hr1G058400.1	Barley	cytosol, endoplasmic reticulum, peroxisome	71.92	71.37
Zm00001d037915_P001	Maize	cytosol, peroxisome, plastid	67.69	67.18
TraesCS1D01G233500.1	Wheat	peroxisome	70.38	66.55
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	42.69	55.22
OQU77870	Sorghum	plastid	65.77	53.6
VIT_15s0048g02530.t01	Wine grape	plasma membrane	36.15	46.53
Os09t0532200-00	Rice	plastid	38.08	45.41
KRH68967	Soybean	extracellular, plasma membrane	31.15	41.12
KRG97253	Soybean	endoplasmic reticulum, extracellular, plasma membrane	30.77	40.61
CDY51712	Canola	cytosol, peroxisome, plasma membrane	35.0	39.39
Bra037412.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.0	39.39
CDY07145	Canola	cytosol, peroxisome, plasma membrane	34.23	38.36
AT4G01410.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	33.08	37.89
CDX91852	Canola	cytosol, peroxisome, plasma membrane	32.31	36.68
Solyc10g005040.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	31.15	36.65
Bra000927.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.92	36.24
CDX74380	Canola	cytosol, peroxisome, plasma membrane	31.92	36.24
PGSC0003DMT400029400	Potato	cytosol, peroxisome, plastid, vacuole	31.15	35.53
KRH47782	Soybean	cytosol	33.46	34.94
KRH06353	Soybean	cytosol	33.08	34.82
Os11t0157200-03	Rice	plasma membrane	25.77	31.9
Os12t0159600-01	Rice	plastid	25.77	31.6
Os02t0538700-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	26.15	30.36
Os08t0102700-01	Rice	cytosol, peroxisome, plasma membrane	24.62	28.19
Os04t0685400-01	Rice	golgi, plasma membrane, plastid	23.85	28.18
Os04t0416700-01	Rice	golgi, plasma membrane	23.85	28.18
Os02t0100600-01	Rice	endoplasmic reticulum, golgi, nucleus	19.62	23.83

Protein Annotations

MapMan:35.2	EntrezGene:4338569	ProteinID:BAF17254.1	ProteinID:BAS93657.1	GO:GO:0003674	GO:GO:0004871
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009506	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0046658	InterPro:LEA_2	EnsemblPlantsGene:Os05g0367900	EnsemblPlants:Os05t0367900-01	PFAM:PF03168	PANTHER:PTHR31415
PANTHER:PTHR31415:SF24	UniProt:Q0DIR9	TMHMM:TMhelix	UniParc:UPI0000E1247D	RefSeq:XP_015638727.1	SEG:seg

Description

Harpin-induced 1 domain containing protein. (Os05t0367900-01)

Coordinates

chr5:+:17664405..17665461

Molecular Weight (calculated)

26761.1 Da

IEP (calculated)

8.737

GRAVY (calculated)

0.170

Length

260 amino acids

Sequence
(BLAST)

001: MAEHHLPPEP ADEPHHHNHG GKAAVHADDL KPGGRRRRYG YYYGDGYGSA DPARTLCFVV LVVILLAGIT ALVLYLVYRP SRPAFAVTSV AVYSLSLNGT
101: GTGTGAVAGG PATLAASFQL TLVIRNPNER SAARYDRLAA YVAYRGEPIT APAPMPPLVQ DADSAVAVAP VLGAGAAAPP VPVSPDTAAA LATDVSYGVV
201: ALRVVVLGRV RFVSGPFRSG WHSMYARCDL LVGVRKSGGG GAGGGPEAPL LGNPTCAVDM

Best Arabidopsis Sequence Match ( AT4G01410.1 )
(BLAST)

001: MGEGEAKAEH AAKADHKNAP SASSTPESYS KEGGGGGGDA RRAICGAIFT ILVILGIIAL ILWLVYRPHK PRLTVVGAAI YDLNFTAPPL ISTSVQFSVL
101: ARNPNRRVSI HYDKLSMYVT YKDQIITPPL PLPPLRLGHK STVVIAPVMG GNGIPVSPEV ANGLKNDEAY GVVLMRVVIF GRLRWKAGAI KTGRYGFYAR
201: CDVWLRFNPS SNGQVPLLAP STCKVDV

Arabidopsis Description

At4g01410 [Source:UniProtKB/TrEMBL;Acc:Q9M132]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.