Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- golgi 4
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_15s0048g02530.t01 | Wine grape | plasma membrane | 59.2 | 58.91 |
| KRG97253 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 54.23 | 55.33 |
| KRH68967 | Soybean | extracellular, plasma membrane | 52.74 | 53.81 |
| Solyc10g005040.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 50.75 | 46.15 |
| Os09t0532200-00 | Rice | plastid | 49.75 | 45.87 |
| PGSC0003DMT400029400 | Potato | cytosol, peroxisome, plastid, vacuole | 51.24 | 45.18 |
| KRH47782 | Soybean | cytosol | 54.23 | 43.78 |
| Os05t0367900-01 | Rice | plastid | 55.22 | 42.69 |
| KRH06353 | Soybean | cytosol | 51.74 | 42.11 |
| AT4G01410.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 47.26 | 41.85 |
| TraesCS5A01G320200.1 | Wheat | cytosol, peroxisome, vacuole | 46.77 | 41.78 |
| CDY51712 | Canola | cytosol, peroxisome, plasma membrane | 47.76 | 41.56 |
| Bra037412.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 47.76 | 41.56 |
| CDX91852 | Canola | cytosol, peroxisome, plasma membrane | 47.26 | 41.48 |
| TraesCS5B01G320400.1 | Wheat | cytosol, plasma membrane, vacuole | 46.27 | 41.33 |
| TraesCS5D01G326100.1 | Wheat | cytosol, plasma membrane, vacuole | 45.77 | 41.07 |
| CDX74380 | Canola | cytosol, peroxisome, plasma membrane | 46.77 | 41.05 |
| Bra000927.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 46.77 | 41.05 |
| CDY07145 | Canola | cytosol, peroxisome, plasma membrane | 47.26 | 40.95 |
| TraesCS1B01G245500.1 | Wheat | cytosol | 51.24 | 40.71 |
| Zm00001d021289_P001 | Maize | mitochondrion | 44.28 | 40.64 |
| TraesCS1A01G232200.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 49.75 | 39.37 |
| HORVU1Hr1G058400.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 50.75 | 38.93 |
| EER99240 | Sorghum | golgi | 41.79 | 38.36 |
| TraesCS1D01G233500.1 | Wheat | peroxisome | 50.25 | 36.73 |
| Zm00001d037915_P001 | Maize | cytosol, peroxisome, plastid | 46.27 | 35.5 |
| HORVU5Hr1G081610.1 | Barley | golgi, nucleus, plastid | 45.27 | 34.6 |
| GSMUA_Achr9P29670_001 | Banana | cytosol, extracellular, mitochondrion, plasma membrane | 27.36 | 31.25 |
| GSMUA_Achr10P... | Banana | plasma membrane | 32.34 | 30.81 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular, mitochondrion, peroxisome | 27.36 | 30.73 |
| GSMUA_Achr8P34450_001 | Banana | plasma membrane | 31.84 | 30.62 |
| GSMUA_Achr6P35580_001 | Banana | cytosol, extracellular, plastid | 14.43 | 30.21 |
| GSMUA_Achr9P08960_001 | Banana | plasma membrane | 30.85 | 29.52 |
| OQU77870 | Sorghum | plastid | 46.77 | 29.47 |
| GSMUA_AchrUn_... | Banana | cytosol, plasma membrane, plastid | 30.35 | 28.5 |
| GSMUA_Achr7P03290_001 | Banana | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 29.85 | 28.17 |
| GSMUA_Achr4P18020_001 | Banana | cytosol, endoplasmic reticulum, golgi, plastid | 27.86 | 26.67 |
| GSMUA_Achr6P19500_001 | Banana | endoplasmic reticulum, plasma membrane | 27.86 | 26.54 |
| GSMUA_Achr5P14440_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane, plastid | 26.87 | 25.96 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP07400_001 | EnsemblPlants:GSMUA_AchrUn_randomT07400_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG07400_001 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0009506 | GO:GO:0016020 | GO:GO:0016021 | InterPro:LEA_2 | PANTHER:PTHR31415 | PANTHER:PTHR31415:SF9 |
| PFAM:PF03168 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000295E3C8 | UniProt:M0U751 | MapMan:35.1 |
Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:Projected from Arabidopsis thaliana (AT4G01410) TAIR;Acc:AT4G01410]
Coordinates
chrchrUn_random:-:32243852..32244457
Molecular Weight (calculated)
21753.5 Da
IEP (calculated)
10.083
GRAVY (calculated)
0.141
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDDKKGRRA SPGRLLVTSL LLFLLLAGIT ALVLYLVYRP SKPRFTVSAA AIYDISNASS QANAISTSMQ FTLVIRNPND RASVFYDRLS AYVSYRNQPI
101: TPPAALPPMF QEKDSTVAIS PVLGGGFVPI SGDVAAGLAT DQAYGVVGLR LVLLGRLRYK SGPFRSNWYG LYVRCDMLTG FRKGVTGPVP LLGEPECKVD
201: T
101: TPPAALPPMF QEKDSTVAIS PVLGGGFVPI SGDVAAGLAT DQAYGVVGLR LVLLGRLRYK SGPFRSNWYG LYVRCDMLTG FRKGVTGPVP LLGEPECKVD
201: T
001: MGEGEAKAEH AAKADHKNAP SASSTPESYS KEGGGGGGDA RRAICGAIFT ILVILGIIAL ILWLVYRPHK PRLTVVGAAI YDLNFTAPPL ISTSVQFSVL
101: ARNPNRRVSI HYDKLSMYVT YKDQIITPPL PLPPLRLGHK STVVIAPVMG GNGIPVSPEV ANGLKNDEAY GVVLMRVVIF GRLRWKAGAI KTGRYGFYAR
201: CDVWLRFNPS SNGQVPLLAP STCKVDV
101: ARNPNRRVSI HYDKLSMYVT YKDQIITPPL PLPPLRLGHK STVVIAPVMG GNGIPVSPEV ANGLKNDEAY GVVLMRVVIF GRLRWKAGAI KTGRYGFYAR
201: CDVWLRFNPS SNGQVPLLAP STCKVDV
Arabidopsis Description
At4g01410 [Source:UniProtKB/TrEMBL;Acc:Q9M132]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.