Factsheet for TraesCS5B01G320400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 1
vacuole 1
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G326100.1	Wheat	cytosol, plasma membrane, vacuole	95.56	95.98
TraesCS5A01G320200.1	Wheat	cytosol, peroxisome, vacuole	95.11	95.11
HORVU5Hr1G081610.1	Barley	golgi, nucleus, plastid	93.78	80.23
Os09t0532200-00	Rice	plastid	62.22	64.22
Zm00001d021289_P001	Maize	mitochondrion	61.33	63.01
EER99240	Sorghum	golgi	56.0	57.53
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	41.33	46.27
KRH68967	Soybean	extracellular, plasma membrane	35.56	40.61
KRG97253	Soybean	endoplasmic reticulum, extracellular, plasma membrane	34.22	39.09
VIT_15s0048g02530.t01	Wine grape	plasma membrane	34.22	38.12
TraesCS5B01G498200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	33.78	35.51
TraesCS1B01G245500.1	Wheat	cytosol	39.56	35.18
Solyc10g005040.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	33.78	34.39
TraesCS5B01G125000.1	Wheat	cytosol, extracellular, plasma membrane	26.67	34.29
TraesCS4B01G115700.1	Wheat	peroxisome, plasma membrane, plastid	32.0	33.8
PGSC0003DMT400029400	Potato	cytosol, peroxisome, plastid, vacuole	34.22	33.77
AT4G01410.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	33.33	33.04
TraesCS2B01G232700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	31.56	33.02
TraesCS5B01G124900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	30.22	32.69
Bra037412.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.33	32.47
CDY51712	Canola	cytosol, peroxisome, plasma membrane	33.33	32.47
CDY07145	Canola	cytosol, peroxisome, plasma membrane	33.33	32.33
TraesCS7B01G227800.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	30.67	31.94
Bra000927.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.44	31.88
CDX74380	Canola	cytosol, peroxisome, plasma membrane	32.44	31.88
CDX91852	Canola	cytosol, peroxisome, plasma membrane	32.44	31.88
KRH47782	Soybean	cytosol	33.78	30.52
KRH06353	Soybean	cytosol	33.33	30.36
TraesCS2B01G313900.1	Wheat	extracellular, plasma membrane	28.89	30.09
TraesCS2B01G603000.1	Wheat	cytosol, golgi, plasma membrane	28.0	28.51
TraesCS6B01G383000.1	Wheat	endoplasmic reticulum	24.44	26.96
TraesCS5B01G103800.1	Wheat	cytosol	21.78	23.33

Protein Annotations

EnsemblPlants:TraesCS5B01G320400.1	EnsemblPlantsGene:TraesCS5B01G320400	PANTHER:PTHR31415	PANTHER:PTHR31415:SF9	SEG:seg	TMHMM:TMhelix
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:505786310..505786987

Molecular Weight (calculated)

23360.4 Da

IEP (calculated)

9.133

GRAVY (calculated)

0.287

Length

225 amino acids

Sequence
(BLAST)

001: MESSKKNLCE IHRGDGRGRR VLAASLLGAA VVAAVIALAL FLVYRPAKPQ ATVARAGVYR LVSAAATPGA NNSAPTPYAL SATVQFTLLL HNPSDRTAVV
101: YDRLLAYVTY RGEMVAPPAQ LPLVLQDPGA DVAMSPLLGG DGGAPVPVSA DAVDALHADC VAGRVQLRLV VMGRVRYRSG PFKSAWRDLY VRCDAILGLT
201: VQAAAGGGGA GDVPLLEYPK CAVDA

Best Arabidopsis Sequence Match ( AT4G01410.1 )
(BLAST)

001: MGEGEAKAEH AAKADHKNAP SASSTPESYS KEGGGGGGDA RRAICGAIFT ILVILGIIAL ILWLVYRPHK PRLTVVGAAI YDLNFTAPPL ISTSVQFSVL
101: ARNPNRRVSI HYDKLSMYVT YKDQIITPPL PLPPLRLGHK STVVIAPVMG GNGIPVSPEV ANGLKNDEAY GVVLMRVVIF GRLRWKAGAI KTGRYGFYAR
201: CDVWLRFNPS SNGQVPLLAP STCKVDV

Arabidopsis Description

At4g01410 [Source:UniProtKB/TrEMBL;Acc:Q9M132]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.