Factsheet for TraesCS5B01G124900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, endoplasmic reticulum

Predictor Summary:

endoplasmic reticulum 1
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G133300.1	Wheat	cytosol	92.79	92.79
TraesCS5B01G125000.1	Wheat	cytosol, extracellular, plasma membrane	72.12	85.71
Os12t0159600-01	Rice	plastid	79.33	77.83
EES16682	Sorghum	golgi, plasma membrane, plastid	79.33	77.1
TraesCS5A01G125600.1	Wheat	cytosol, peroxisome, plasma membrane	82.21	76.68
Zm00001d023468_P001	Maize	extracellular	76.92	75.12
TraesCS4B01G115700.1	Wheat	peroxisome, plasma membrane, plastid	72.6	70.89
HORVU5Hr1G040160.3	Barley	golgi, peroxisome	88.46	67.4
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	26.92	58.33
GSMUA_Achr9P08960_001	Banana	plasma membrane	56.25	55.71
TraesCS5B01G498200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	51.92	50.47
PGSC0003DMT400050538	Potato	plasma membrane	50.0	49.76
PGSC0003DMT400015090	Potato	plasma membrane	49.52	49.52
Solyc06g074040.1.1	Tomato	plasma membrane	48.56	48.56
TraesCS2B01G232700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	50.0	48.37
Solyc11g068890.1.1	Tomato	plasma membrane	48.56	48.33
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	47.12	47.34
CDY29084	Canola	mitochondrion	37.98	45.93
VIT_06s0080g01200.t01	Wine grape	plasma membrane	45.67	45.67
TraesCS2B01G313900.1	Wheat	extracellular, plasma membrane	47.12	45.37
TraesCS2B01G603000.1	Wheat	cytosol, golgi, plasma membrane	48.08	45.25
TraesCS7B01G227800.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	46.63	44.91
Bra035001.1-P	Field mustard	plasma membrane	44.23	44.66
CDY69513	Canola	plasma membrane	44.23	44.66
AT3G44220.1	Thale cress	plasma membrane	44.23	44.66
Bra002396.1-P	Field mustard	plasma membrane	44.23	44.44
Bra006927.1-P	Field mustard	cytosol	44.23	44.23
CDY69198	Canola	cytosol	44.23	44.23
CDY08687	Canola	plasma membrane	43.75	44.17
CDX90600	Canola	plasma membrane	43.75	43.75
CDY68967	Canola	cytosol	43.75	43.75
AT3G11660.1	Thale cress	plasma membrane	43.75	43.54
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	44.23	43.4
Bra034822.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid	44.23	43.4
CDY72430	Canola	cytosol	43.27	43.27
Bra012801.1-P	Field mustard	plasma membrane	43.27	43.27
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	43.75	43.13
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	43.75	43.13
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	43.75	43.13
AT5G06330.1	Thale cress	plasma membrane	42.79	43.0
CDX92375	Canola	plasma membrane	42.79	43.0
CDY01043	Canola	mitochondrion	43.75	42.92
KRG96252	Soybean	plasma membrane	43.27	42.86
Bra033428.1-P	Field mustard	cytosol	42.79	42.79
Bra038671.1-P	Field mustard	plasma membrane	43.27	42.65
CDX98590	Canola	plasma membrane	42.31	42.51
AT2G35960.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	42.79	42.38
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	42.79	42.38
AT3G52470.1	Thale cress	extracellular, plasma membrane	42.31	42.31
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	42.79	41.78
KRH32836	Soybean	plasma membrane	41.83	41.63
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	42.31	41.12
CDY32068	Canola	plasma membrane	40.38	40.78
KRH72197	Soybean	plasma membrane	40.38	40.58
CDY40419	Canola	plasma membrane	39.9	39.9
Bra017276.1-P	Field mustard	plasma membrane	39.9	39.9
CDY35671	Canola	plasma membrane	39.9	39.71
AT2G35970.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	39.9	39.34
KRH22643	Soybean	plasma membrane	40.87	38.99
KRH26671	Soybean	plasma membrane	41.35	38.91
AT4G09590.1	Thale cress	cytosol, plasma membrane, vacuole	39.42	38.86
CDY09123	Canola	plasma membrane	38.46	38.28
Bra020177.1-P	Field mustard	plasma membrane	37.5	37.32
KRH67997	Soybean	plastid	44.23	36.51
CDY55755	Canola	plasma membrane	35.58	34.74
CDX81001	Canola	plastid	35.58	34.42
Bra005892.1-P	Field mustard	plasma membrane	35.1	34.27
AT5G05657.1	Thale cress	plastid	22.12	33.58
TraesCS5B01G320400.1	Wheat	cytosol, plasma membrane, vacuole	32.69	30.22
CDX95339	Canola	plasma membrane	41.83	29.19
TraesCS6B01G383000.1	Wheat	endoplasmic reticulum	28.37	28.92
TraesCS5B01G103800.1	Wheat	cytosol	26.92	26.67
TraesCS1B01G245500.1	Wheat	cytosol	29.33	24.11

Protein Annotations

EnsemblPlants:TraesCS5B01G124900.1	EnsemblPlantsGene:TraesCS5B01G124900	InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF11	PFAM:PF03168
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5B:+:226759217..226760031

Molecular Weight (calculated)

22963.6 Da

IEP (calculated)

8.233

GRAVY (calculated)

0.028

Length

208 amino acids

Sequence
(BLAST)

001: MGKDCGNHHD DHFRNGCRRL LKVLLGMAFI VAVIALIVYL VLRPTHPSFF LQDASLRQLD LSNSSGLLST SLQVTVASRN PNDRIGVYYD RLDVYASYDF
101: QQITVAASLP PVYQGHGDID IWSPVLDGPN VPFAPYLASK ISQDCQAGHL VLHVKIDGRV RWKVGSWISG HYHLFVTCQA LLETVRGNGT PGASGFKFQK
201: TTGCHVEV

Best Arabidopsis Sequence Match ( AT3G44220.1 )
(BLAST)

001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV

Arabidopsis Description

At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.