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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 1
  • mitochondrion 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid, vacuole
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT5G06330.1 Thale cress plasma membrane 60.58 40.1
AT3G11660.1 Thale cress plasma membrane 48.91 32.06
AT2G35960.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 48.18 31.43
AT3G52470.1 Thale cress extracellular, plasma membrane 45.99 30.29
Bra005892.1-P Field mustard plasma membrane 45.99 29.58
CDY55755 Canola plasma membrane 45.99 29.58
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 43.8 28.99
AT2G35970.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 44.53 28.91
PGSC0003DMT400042351 Potato extracellular, plasma membrane 44.53 28.91
KRG96252 Soybean plasma membrane 43.8 28.57
KRH72197 Soybean plasma membrane 43.07 28.5
AT4G09590.1 Thale cress cytosol, plasma membrane, vacuole 43.8 28.44
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 43.8 28.44
GSMUA_Achr9P08960_001 Banana plasma membrane 43.07 28.1
CDX81001 Canola plastid 43.8 27.91
PGSC0003DMT400072342 Potato extracellular, plasma membrane 42.34 27.49
AT3G44220.1 Thale cress plasma membrane 40.88 27.18
KRH32836 Soybean plasma membrane 40.15 26.32
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 40.15 26.19
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 33.58 25.7
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 36.5 23.7
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 36.5 23.47
GSMUA_Achr8P34450_001 Banana plasma membrane 35.77 23.45
KRH67997 Soybean plastid 43.07 23.41
GSMUA_Achr10P... Banana plasma membrane 35.77 23.22
HORVU7Hr1G078320.1 Barley cytosol 36.5 23.15
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 35.04 23.08
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 35.04 23.08
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 35.77 23.0
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 35.77 23.0
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 35.77 22.9
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 35.77 22.69
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 35.77 22.69
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 35.77 22.69
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 35.04 22.64
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 35.04 22.54
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 35.04 22.54
EES16682 Sorghum golgi, plasma membrane, plastid 35.04 22.43
Os11t0157200-03 Rice plasma membrane 34.31 22.38
Zm00001d016733_P001 Maize extracellular, plasma membrane 30.66 22.34
Os12t0159600-01 Rice plastid 34.31 22.17
EES06921 Sorghum endoplasmic reticulum 34.31 22.17
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 33.58 22.12
TraesCS5D01G133300.1 Wheat cytosol 33.58 22.12
Zm00001d023468_P001 Maize extracellular 34.31 22.07
Zm00001d052776_P001 Maize extracellular 34.31 22.07
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 34.31 21.96
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 27.74 21.59
EES08013 Sorghum golgi, plasma membrane, plastid 33.58 21.5
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 33.58 21.5
Os04t0685400-01 Rice golgi, plasma membrane, plastid 34.31 21.36
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 33.58 21.3
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 34.31 21.27
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 34.31 21.27
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 34.31 21.27
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 35.04 21.15
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 27.01 21.14
Os04t0416700-01 Rice golgi, plasma membrane 33.58 20.91
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 32.85 20.83
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 32.85 20.83
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 32.85 20.83
Zm00001d026664_P001 Maize extracellular 33.58 20.81
EES12138 Sorghum extracellular, golgi, plasma membrane 33.58 20.81
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 32.85 20.45
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 33.58 20.44
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 32.85 20.18
EES13132 Sorghum cytosol 32.12 20.09
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 13.87 19.79
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 32.12 19.64
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 29.2 18.6
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 29.2 18.6
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 29.2 18.6
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 29.93 18.3
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 28.47 18.22
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 28.47 18.22
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 28.47 18.22
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 27.74 17.59
HORVU5Hr1G040160.3 Barley golgi, peroxisome 35.04 17.58
AT5G53730.1 Thale cress plastid 27.01 17.37
HORVU2Hr1G040910.1 Barley peroxisome 29.93 17.23
AT4G01410.1 Thale cress endoplasmic reticulum, peroxisome, plasma membrane 27.01 16.3
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 21.17 14.57
Protein Annotations
MapMan:35.1EntrezGene:830449ProteinID:AED90904.1ArrayExpress:AT5G05657EnsemblPlantsGene:AT5G05657RefSeq:AT5G05657
TAIR:AT5G05657RefSeq:AT5G05657-TAIR-GEnsemblPlants:AT5G05657.1TAIR:AT5G05657.1Unigene:At.54732GO:GO:0003674
GO:GO:0004871GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006950GO:GO:0006952
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009506GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0046658RefSeq:NP_850776.2PANTHER:PTHR31415PANTHER:PTHR31415:SF2UniProt:Q3E9K9
UniParc:UPI0000196BD1:::::
Description
BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT5G06330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3 /.../lants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G05657]
Coordinates
chr5:+:1688990..1689571
Molecular Weight (calculated)
15651.6 Da
IEP (calculated)
6.214
GRAVY (calculated)
-0.245
Length
137 amino acids
Sequence
(BLAST)
001: MHSHNPPIDC AILLPSKPRF IFQDVTVFNF NVSGNPSDLN TPVVQFNLSF RNPNANIRIY YDTLDVYAFY GNGSQQIIIP TPMPSTYQGH KEDSVWSPYI
101: PVVPYNALYL DDQHHSRDGN MLMLHLDGRI SWLLLGN
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.