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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • endoplasmic reticulum 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, endoplasmic reticulum, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G09590.1 Thale cress cytosol, plasma membrane, vacuole 98.1 98.1
AT2G35960.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 82.46 82.86
CDY40419 Canola plasma membrane 70.14 71.15
Bra017276.1-P Field mustard plasma membrane 70.14 71.15
CDY32068 Canola plasma membrane 69.19 70.87
AT3G52470.1 Thale cress extracellular, plasma membrane 66.82 67.79
AT3G11660.1 Thale cress plasma membrane 56.4 56.94
AT5G06330.1 Thale cress plasma membrane 52.13 53.14
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 51.18 52.17
KRH72197 Soybean plasma membrane 49.29 50.24
KRH32836 Soybean plasma membrane 48.82 49.28
AT3G44220.1 Thale cress plasma membrane 47.87 49.03
KRG96252 Soybean plasma membrane 48.34 48.57
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 47.87 47.87
PGSC0003DMT400042351 Potato extracellular, plasma membrane 47.39 47.39
PGSC0003DMT400072342 Potato extracellular, plasma membrane 45.5 45.5
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 44.55 44.76
AT5G05657.1 Thale cress plastid 28.91 44.53
GSMUA_Achr9P08960_001 Banana plasma membrane 44.08 44.29
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 36.02 42.46
GSMUA_Achr8P34450_001 Banana plasma membrane 41.71 42.11
GSMUA_Achr10P... Banana plasma membrane 41.71 41.71
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 34.12 41.14
KRH67997 Soybean plastid 48.82 40.87
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 40.28 40.87
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 40.28 40.87
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 41.23 40.85
Os11t0157200-03 Rice plasma membrane 40.28 40.48
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 39.34 39.9
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 33.18 39.77
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 40.28 39.72
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 39.81 39.62
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 18.01 39.58
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 39.81 39.44
TraesCS5D01G133300.1 Wheat cytosol 38.86 39.42
Os12t0159600-01 Rice plastid 39.34 39.15
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 39.34 38.97
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 39.34 38.97
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 38.86 38.86
Zm00001d023468_P001 Maize extracellular 38.86 38.5
Zm00001d052776_P001 Maize extracellular 38.86 38.5
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 38.86 38.5
EES16682 Sorghum golgi, plasma membrane, plastid 38.86 38.32
HORVU7Hr1G078320.1 Barley cytosol 38.86 37.96
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 38.86 37.96
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 38.39 37.5
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 38.39 37.5
EES13132 Sorghum cytosol 38.39 36.99
EES08013 Sorghum golgi, plasma membrane, plastid 37.44 36.92
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 36.97 36.45
Zm00001d016733_P001 Maize extracellular, plasma membrane 32.23 36.17
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 37.44 35.75
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 37.44 35.75
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 37.44 35.75
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 36.02 35.51
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 36.97 35.45
Zm00001d026664_P001 Maize extracellular 36.97 35.29
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 36.97 34.98
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 35.55 34.72
Os04t0685400-01 Rice golgi, plasma membrane, plastid 36.02 34.55
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 36.97 34.36
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 35.07 34.26
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 35.07 34.26
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 35.07 34.26
EES12138 Sorghum extracellular, golgi, plasma membrane 35.55 33.94
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 36.02 33.78
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 33.65 33.02
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 33.65 33.02
Os04t0416700-01 Rice golgi, plasma membrane 34.12 32.73
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 34.6 32.59
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 33.18 32.56
EES06921 Sorghum endoplasmic reticulum 32.7 32.55
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 32.7 32.24
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 32.7 32.24
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 32.7 32.24
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 32.7 31.94
AT5G53730.1 Thale cress plastid 32.23 31.92
HORVU5Hr1G040160.3 Barley golgi, peroxisome 41.23 31.87
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 33.65 31.7
HORVU2Hr1G040910.1 Barley peroxisome 32.7 28.99
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 22.27 23.62
AT4G01410.1 Thale cress endoplasmic reticulum, peroxisome, plasma membrane 24.64 22.91
Protein Annotations
MapMan:35.1EntrezGene:818170UniProt:A0A178VSW4ProteinID:AAD21460.1ProteinID:AEC09184.1ArrayExpress:AT2G35970
EnsemblPlantsGene:AT2G35970RefSeq:AT2G35970TAIR:AT2G35970RefSeq:AT2G35970-TAIR-GEnsemblPlants:AT2G35970.1TAIR:AT2G35970.1
Unigene:At.66322GO:GO:0003674GO:GO:0004871GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006950GO:GO:0006952GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009506
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0046658InterPro:LEA_2RefSeq:NP_181141.1
ProteinID:OAP09537.1PFAM:PF03168PFscan:PS51257PANTHER:PTHR31415PANTHER:PTHR31415:SF2UniProt:Q9SJ53
TMHMM:TMhelixUniParc:UPI00000A8587SEG:seg:::
Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:UniProtKB/TrEMBL;Acc:Q9SJ53]
Coordinates
chr2:+:15109007..15109773
Molecular Weight (calculated)
23163.0 Da
IEP (calculated)
8.988
GRAVY (calculated)
0.028
Length
211 amino acids
Sequence
(BLAST)
001: MTTKECGNHG GGGGGGGTAC RICGAIIGFI IIVLMTIFLV SIILQPKKPE FILQDTTVYA FNLSQPNLLT SKFQITIASR NRNSNIGIYY DHLHAYASYR
101: NQQITLASDL PPTYQRHKEN SVWSPLLYGN QVPIAPFNAV ALGDEQNSGV FTLTICVDGR VRWKVGTLTI GNYHLHVRCQ AFINQADKAA GVHVGENTVK
201: YTLINKCSVN F
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.