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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d026664_P001 Maize extracellular 93.15 92.31
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 84.93 84.16
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 84.47 83.71
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 84.02 83.64
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 83.56 82.81
Os04t0685400-01 Rice golgi, plasma membrane, plastid 82.19 81.82
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 63.47 64.95
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 45.21 56.25
GSMUA_Achr10P... Banana plasma membrane 53.88 55.92
GSMUA_Achr8P34450_001 Banana plasma membrane 52.51 55.02
PGSC0003DMT400015090 Potato plasma membrane 48.86 51.44
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 42.01 51.4
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 48.4 50.24
Solyc06g074040.1.1 Tomato plasma membrane 47.49 50.0
EES16682 Sorghum golgi, plasma membrane, plastid 47.95 49.07
VIT_06s0080g01200.t01 Wine grape plasma membrane 45.66 48.08
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 46.12 47.42
PGSC0003DMT400050538 Potato plasma membrane 45.21 47.37
Solyc11g068890.1.1 Tomato plasma membrane 45.21 47.37
EES08013 Sorghum golgi, plasma membrane, plastid 45.21 46.26
KRH26671 Soybean plasma membrane 45.66 45.25
AT3G44220.1 Thale cress plasma membrane 42.01 44.66
CDY08687 Canola plasma membrane 42.01 44.66
Bra035001.1-P Field mustard plasma membrane 42.01 44.66
CDY69513 Canola plasma membrane 42.01 44.66
EES06921 Sorghum endoplasmic reticulum 42.01 43.4
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 41.55 43.33
CDX90600 Canola plasma membrane 40.64 42.79
Bra012801.1-P Field mustard plasma membrane 40.64 42.79
CDY72430 Canola cytosol 40.64 42.79
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 41.55 42.52
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 40.18 42.51
Bra033428.1-P Field mustard cytosol 40.18 42.31
Bra006927.1-P Field mustard cytosol 39.73 41.83
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 40.64 41.78
EES12138 Sorghum extracellular, golgi, plasma membrane 42.01 41.63
CDY68967 Canola cytosol 39.27 41.35
CDY69198 Canola cytosol 39.27 41.35
AT3G52470.1 Thale cress extracellular, plasma membrane 39.27 41.35
Bra002396.1-P Field mustard plasma membrane 38.81 41.06
KRH72197 Soybean plasma membrane 38.81 41.06
AT2G35960.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 39.27 40.95
KRH32836 Soybean plasma membrane 38.81 40.67
CDX92375 Canola plasma membrane 38.36 40.58
KRG96252 Soybean plasma membrane 38.81 40.48
CDY32068 Canola plasma membrane 37.9 40.29
PGSC0003DMT400072342 Potato extracellular, plasma membrane 38.81 40.28
PGSC0003DMT400042351 Potato extracellular, plasma membrane 38.81 40.28
AT3G11660.1 Thale cress plasma membrane 38.36 40.19
AT5G06330.1 Thale cress plasma membrane 37.9 40.1
CDX98590 Canola plasma membrane 37.9 40.1
KRH22643 Soybean plasma membrane 39.73 39.91
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 38.36 39.81
Bra038671.1-P Field mustard plasma membrane 38.36 39.81
CDY29084 Canola mitochondrion 31.05 39.53
CDY40419 Canola plasma membrane 37.44 39.42
Bra017276.1-P Field mustard plasma membrane 37.44 39.42
CDY01043 Canola mitochondrion 37.9 39.15
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 37.9 39.15
Bra034822.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid 37.9 39.15
AT2G35970.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 36.99 38.39
AT4G09590.1 Thale cress cytosol, plasma membrane, vacuole 36.99 38.39
CDY35671 Canola plasma membrane 36.53 38.28
CDY09123 Canola plasma membrane 35.16 36.84
CDY55755 Canola plasma membrane 35.62 36.62
Bra020177.1-P Field mustard plasma membrane 34.7 36.36
Bra005892.1-P Field mustard plasma membrane 35.16 36.15
CDX81001 Canola plastid 35.16 35.81
KRH67997 Soybean plastid 40.64 35.32
AT5G05657.1 Thale cress plastid 20.09 32.12
CDX95339 Canola plasma membrane 39.73 29.19
OQU84133 Sorghum endoplasmic reticulum, golgi, nucleus 26.94 25.43
EER99240 Sorghum golgi 25.11 25.11
OQU77870 Sorghum plastid 30.14 20.69
Protein Annotations
MapMan:35.1EntrezGene:8076500UniProt:C5YAZ6EnsemblPlants:EES13132ProteinID:EES13132ProteinID:EES13132.1
GO:GO:0003674GO:GO:0004871GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006950
GO:GO:0006952GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009506GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0046658InterPro:LEA_2PFAM:PF03168PANTHER:PTHR31415
PANTHER:PTHR31415:SF8EnsemblPlantsGene:SORBI_3006G274400unigene:Sbi.8256TMHMM:TMhelixUniParc:UPI0001A87633RefSeq:XP_002448804.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr6:-:60567060..60576530
Molecular Weight (calculated)
24150.2 Da
IEP (calculated)
8.191
GRAVY (calculated)
0.162
Length
219 amino acids
Sequence
(BLAST)
001: MAVKDCGGHK GCECERERLY RRCCAALVAF ILLVLFVILV VWLVLRPHKP KFYLQDLSVL CLNVTPPAST YLFTTMQATV AARNVNDRVG VYYDQADAYA
101: EYKGVAITVP TRLPVQYQGP NDASVWSPFL RSLDSVQLPP QLAVALAQDE TAGYVLIDVR VDGWVRWKVG TWISGHYHLR VNCPALLTVN EGKGSYGANT
201: GGGTGYFRFQ QAAACAVDV
Best Arabidopsis Sequence Match ( AT3G44220.1 )
(BLAST)
001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV
Arabidopsis Description
At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.