Factsheet for Solyc11g068890.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 2
plasma membrane 2
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050538	Potato	plasma membrane	93.78	93.78
Solyc06g074040.1.1	Tomato	plasma membrane	74.16	74.52
VIT_06s0080g01200.t01	Wine grape	plasma membrane	56.94	57.21
Bra035001.1-P	Field mustard	plasma membrane	55.98	56.8
CDY08687	Canola	plasma membrane	55.98	56.8
CDY69513	Canola	plasma membrane	55.98	56.8
AT3G44220.1	Thale cress	plasma membrane	55.02	55.83
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	53.11	52.61
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	52.15	51.17
TraesCS5B01G125000.1	Wheat	cytosol, extracellular, plasma membrane	42.11	50.29
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	51.2	50.0
TraesCS5D01G133400.1	Wheat	golgi, plasma membrane, plastid	49.76	50.0
GSMUA_Achr9P08960_001	Banana	plasma membrane	49.76	49.52
TraesCS5A01G125800.1	Wheat	golgi, plasma membrane, plastid	49.28	49.52
KRH26671	Soybean	plasma membrane	51.67	48.87
GSMUA_Achr9P29670_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	41.15	48.86
GSMUA_Achr6P19500_001	Banana	endoplasmic reticulum, plasma membrane	49.28	48.82
Os12t0159600-01	Rice	plastid	49.28	48.58
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	48.8	48.57
TraesCS5B01G124900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	48.33	48.56
GSMUA_Achr10P...	Banana	plasma membrane	48.8	48.34
TraesCS5D01G133300.1	Wheat	cytosol	47.85	48.08
CDX92375	Canola	plasma membrane	47.37	47.83
HORVU7Hr1G078320.1	Barley	cytosol	49.28	47.69
CDX98590	Canola	plasma membrane	46.89	47.34
Bra002396.1-P	Field mustard	plasma membrane	46.89	47.34
TraesCS7B01G227800.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	48.8	47.22
EES16682	Sorghum	golgi, plasma membrane, plastid	48.33	47.2
Os11t0157200-03	Rice	plasma membrane	47.37	47.14
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	21.53	46.88
TraesCS7A01G327200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	48.33	46.76
TraesCS7D01G323900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	48.33	46.76
CDY35671	Canola	plasma membrane	46.41	46.41
GSMUA_Achr11P...	Banana	cytosol, extracellular, mitochondrion, peroxisome	39.71	46.37
KRH22643	Soybean	plasma membrane	48.33	46.33
CDY09123	Canola	plasma membrane	45.45	45.45
GSMUA_Achr8P34450_001	Banana	plasma membrane	45.45	45.45
EES13132	Sorghum	cytosol	47.37	45.21
HORVU4Hr1G021190.1	Barley	golgi, plasma membrane, plastid	45.93	45.07
Zm00001d023468_P001	Maize	extracellular	45.93	45.07
TraesCS4B01G115700.1	Wheat	peroxisome, plasma membrane, plastid	45.93	45.07
EES08013	Sorghum	golgi, plasma membrane, plastid	45.93	44.86
Zm00001d041927_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	45.45	44.81
TraesCS4A01G199700.1	Wheat	golgi, plasma membrane, plastid	45.45	44.6
Zm00001d052776_P001	Maize	extracellular	45.45	44.6
Bra020177.1-P	Field mustard	plasma membrane	44.5	44.5
TraesCS2D01G596200.1	Wheat	cytosol, golgi, plasma membrane	46.89	44.34
TraesCS4D01G113300.1	Wheat	peroxisome, plasma membrane, plastid	44.98	44.13
Zm00001d034977_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	44.98	43.93
TraesCS2A01G583600.1	Wheat	cytosol, golgi, plasma membrane	46.41	43.89
HORVU2Hr1G123370.1	Barley	cytosol, golgi, plasma membrane	45.93	43.64
EES14353	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	44.5	43.46
TraesCS2B01G603000.1	Wheat	cytosol, golgi, plasma membrane	45.93	43.44
Os04t0685400-01	Rice	golgi, plasma membrane, plastid	45.45	43.18
Zm00001d026664_P001	Maize	extracellular	45.45	42.99
Os08t0102700-01	Rice	cytosol, peroxisome, plasma membrane	46.41	42.73
GSMUA_Achr7P03290_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	43.54	42.72
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	43.54	42.52
Zm00001d016733_P001	Maize	extracellular, plasma membrane	37.32	41.49
TraesCS5A01G125600.1	Wheat	cytosol, peroxisome, plasma membrane	44.02	41.26
TraesCS2D01G210700.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	42.11	40.93
TraesCS2B01G232700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	41.63	40.47
TraesCS2A01G205300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	41.63	40.47
Zm00001d003751_P001	Maize	extracellular, golgi, plasma membrane	43.54	40.44
HORVU2Hr1G073830.1	Barley	extracellular, plasma membrane	41.63	40.28
EES12138	Sorghum	extracellular, golgi, plasma membrane	42.58	40.27
TraesCS2D01G295700.1	Wheat	extracellular, plasma membrane	41.15	39.81
TraesCS2B01G313900.1	Wheat	extracellular, plasma membrane	41.15	39.81
TraesCS2A01G297700.1	Wheat	extracellular, plasma membrane	41.15	39.81
Os04t0416700-01	Rice	golgi, plasma membrane	41.15	39.09
TraesCS5A01G484900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	39.71	38.78
TraesCS5D01G498400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	39.71	38.78
TraesCS5B01G498200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	39.71	38.78
EES06921	Sorghum	endoplasmic reticulum	39.23	38.68
HORVU5Hr1G114220.1	Barley	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	39.71	38.43
Zm00001d025371_P001	Maize	extracellular, golgi, plasma membrane	41.15	38.39
HORVU5Hr1G040160.3	Barley	golgi, peroxisome	48.8	37.36
Solyc03g081230.1.1	Tomato	endoplasmic reticulum, nucleus, plasma membrane	37.8	37.09
HORVU2Hr1G040910.1	Barley	peroxisome	41.63	36.55
Os02t0538700-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	38.28	35.71
Solyc10g005040.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	26.79	25.34
HORVU2Hr1G066420.1	Barley	mitochondrion, plastid	23.92	25.13

Protein Annotations

MapMan:35.1	GO:GO:0003674	GO:GO:0004871	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009506
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0046658	UniProt:K4DA46	InterPro:LEA_2
PFAM:PF03168	PANTHER:PTHR31415	PANTHER:PTHR31415:SF2	EnsemblPlantsGene:Solyc11g068890.1	EnsemblPlants:Solyc11g068890.1.1	TMHMM:TMhelix
UniParc:UPI000276A796	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr11:-:53460693..53461322

Molecular Weight (calculated)

23739.8 Da

IEP (calculated)

8.746

GRAVY (calculated)

0.101

Length

209 amino acids

Sequence
(BLAST)

001: MTEKDCGHHV EDERHNLQRR LITALIVFVT LILFTILLIF LILRPTKPHF ILQDATVYAF NTSTPFNFLT TNIQITIASR NPNDKIGIYY DRLDVYATYR
101: GQQVTLPTLM PQTYQGHKDV SIWSPFVYGN NVPIAPYLGN EISQDIIFGT ILLNVRIDGR VRWKVGNFIS SKYHLDVNCP AYVGIGGKFL GNSVVVGKYQ
201: LVQSCNVDV

Best Arabidopsis Sequence Match ( AT3G44220.1 )
(BLAST)

001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV

Arabidopsis Description

At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.