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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • plastid 3
  • mitochondrion 1
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400042351 Potato extracellular, plasma membrane 94.31 94.31
CDY29084 Canola mitochondrion 46.92 57.56
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 56.4 57.49
KRG96252 Soybean plasma membrane 56.87 57.14
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 57.35 57.08
Bra034822.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid 57.35 57.08
AT3G11660.1 Thale cress plasma membrane 56.4 56.94
Bra038671.1-P Field mustard plasma membrane 56.87 56.87
Bra006927.1-P Field mustard cytosol 55.92 56.73
Bra012801.1-P Field mustard plasma membrane 55.92 56.73
CDX90600 Canola plasma membrane 55.92 56.73
CDY01043 Canola mitochondrion 56.87 56.6
CDY69198 Canola cytosol 55.45 56.25
CDY68967 Canola cytosol 55.45 56.25
CDY72430 Canola cytosol 55.45 56.25
Bra033428.1-P Field mustard cytosol 54.98 55.77
AT3G52470.1 Thale cress extracellular, plasma membrane 53.55 54.33
AT2G35960.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 53.55 53.81
Solyc11g068890.1.1 Tomato plasma membrane 52.61 53.11
Solyc06g074040.1.1 Tomato plasma membrane 52.13 52.88
CDY32068 Canola plasma membrane 51.18 52.43
KRH72197 Soybean plasma membrane 50.71 51.69
AT5G06330.1 Thale cress plasma membrane 50.24 51.21
KRH32836 Soybean plasma membrane 50.71 51.2
CDY40419 Canola plasma membrane 50.24 50.96
Bra017276.1-P Field mustard plasma membrane 50.24 50.96
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 21.8 47.92
AT2G35970.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 47.87 47.87
AT4G09590.1 Thale cress cytosol, plasma membrane, vacuole 47.39 47.39
KRH67997 Soybean plastid 54.98 46.03
GSMUA_Achr9P08960_001 Banana plasma membrane 45.02 45.24
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 44.55 45.19
CDX81001 Canola plastid 45.97 45.12
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 44.08 44.71
CDY55755 Canola plasma membrane 45.02 44.6
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 36.97 44.57
Bra005892.1-P Field mustard plasma membrane 44.55 44.13
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 44.55 43.93
AT5G05657.1 Thale cress plastid 28.44 43.8
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 43.13 43.75
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 43.6 43.19
HORVU7Hr1G078320.1 Barley cytosol 44.08 43.06
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 44.08 43.06
TraesCS5D01G133300.1 Wheat cytosol 42.18 42.79
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 43.6 42.59
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 43.6 42.59
EES16682 Sorghum golgi, plasma membrane, plastid 43.13 42.52
Os11t0157200-03 Rice plasma membrane 42.18 42.38
GSMUA_Achr8P34450_001 Banana plasma membrane 41.71 42.11
Os12t0159600-01 Rice plastid 42.18 41.98
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 41.71 41.31
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 34.12 40.91
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 41.23 40.85
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 41.23 40.85
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 41.23 40.85
Zm00001d052776_P001 Maize extracellular 40.76 40.38
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 40.28 40.09
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 39.81 39.81
EES08013 Sorghum golgi, plasma membrane, plastid 40.28 39.72
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 42.65 39.65
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 41.23 39.37
GSMUA_Achr10P... Banana plasma membrane 39.34 39.34
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 39.81 39.25
Zm00001d023468_P001 Maize extracellular 39.34 38.97
Zm00001d026664_P001 Maize extracellular 40.76 38.91
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 40.76 38.91
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 39.34 38.78
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 40.28 38.46
EES13132 Sorghum cytosol 39.81 38.36
CDX95339 Canola plasma membrane 54.03 38.26
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 38.86 37.27
Os04t0685400-01 Rice golgi, plasma membrane, plastid 38.86 37.27
Os04t0416700-01 Rice golgi, plasma membrane 37.91 36.36
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 38.39 36.32
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 30.81 36.31
Solyc03g081230.1.1 Tomato endoplasmic reticulum, nucleus, plasma membrane 36.02 35.68
Zm00001d016733_P001 Maize extracellular, plasma membrane 31.75 35.64
EES12138 Sorghum extracellular, golgi, plasma membrane 36.97 35.29
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 35.55 34.88
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 35.55 34.72
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 35.07 34.42
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 35.07 34.42
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 35.07 34.26
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 35.07 34.26
HORVU5Hr1G040160.3 Barley golgi, peroxisome 44.08 34.07
EES06921 Sorghum endoplasmic reticulum 34.12 33.96
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 34.6 33.8
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 35.55 33.33
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 33.65 33.18
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 33.65 32.87
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 33.18 32.71
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 32.7 32.24
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 34.12 32.14
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 33.65 31.7
HORVU2Hr1G040910.1 Barley peroxisome 35.55 31.51
Solyc10g005040.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 30.81 29.41
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 24.17 25.63
Protein Annotations
MapMan:35.1GO:GO:0003674GO:GO:0004871GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006950GO:GO:0006952GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009506
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0046658UniProt:K4AST8InterPro:LEA_2
PFAM:PF03168PANTHER:PTHR31415PANTHER:PTHR31415:SF2EnsemblPlantsGene:Solyc01g007220.2EnsemblPlants:Solyc01g007220.2.1TMHMM:TMhelix
UniParc:UPI00027628EDSEG:seg::::
Description
No Description!
Coordinates
chr1:+:1800921..1801986
Molecular Weight (calculated)
23841.9 Da
IEP (calculated)
9.908
GRAVY (calculated)
-0.126
Length
211 amino acids
Sequence
(BLAST)
001: MSDKKCSHHK SKKKKLIRRI CAGVLIFLFL ALLTILIVWA VLHPKKPRFI LQDTTIFTFN VSAPNIFSTS IQTTIYARNP NSKIGIYYDS MHVYATYHNQ
101: QITYYTQIPQ VYQGHKDVNI WSPFVYGNNI PIAPYNGPGL SEDQQNGGVW LDFKIDGRVK WKVGSITTGH YHLHVTCSAY VPLGDRPGYG GVMVGNNAVK
201: YQLARDCSVS V
Best Arabidopsis Sequence Match ( AT3G52470.1 )
(BLAST)
001: MSKDCGNHGG GKEVVVRKLC AAIIAFIVIV LITIFLVWVI LRPTKPRFVL QDATVYAFNL SQPNLLTSNF QVTIASRNPN SKIGIYYDRL HVYATYMNQQ
101: ITLRTAIPPT YQGHKEVNVW SPFVYGTAVP IAPYNSVALG EEKDRGFVGL MIRADGTVRW KVRTLITGKY HIHVRCQAFI NLGNKAAGVL VGDNAVKYTL
201: ANKCSVNV
Arabidopsis Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:UniProtKB/TrEMBL;Acc:Q9SVC8]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.