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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY55755 Canola plasma membrane 93.02 93.9
Bra005892.1-P Field mustard plasma membrane 92.56 93.43
AT5G06330.1 Thale cress plasma membrane 51.16 53.14
CDY72430 Canola cytosol 49.77 51.44
CDX90600 Canola plasma membrane 49.77 51.44
CDY29084 Canola mitochondrion 40.0 50.0
CDY01043 Canola mitochondrion 48.84 49.53
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 48.84 49.53
KRG96252 Soybean plasma membrane 47.91 49.05
CDY69198 Canola cytosol 47.44 49.04
CDY68967 Canola cytosol 47.44 49.04
CDY32068 Canola plasma membrane 46.98 49.03
CDY40419 Canola plasma membrane 46.98 48.56
KRH32836 Soybean plasma membrane 46.05 47.37
KRH72197 Soybean plasma membrane 45.58 47.34
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 45.12 45.97
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 44.19 45.89
PGSC0003DMT400072342 Potato extracellular, plasma membrane 43.72 44.55
PGSC0003DMT400042351 Potato extracellular, plasma membrane 43.72 44.55
GSMUA_Achr9P08960_001 Banana plasma membrane 42.79 43.81
AT5G05657.1 Thale cress plastid 27.91 43.8
CDY08687 Canola plasma membrane 41.86 43.69
CDY69513 Canola plasma membrane 41.86 43.69
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 18.6 41.67
KRH67997 Soybean plastid 48.37 41.27
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 38.14 39.42
CDX98590 Canola plasma membrane 37.67 39.13
CDX92375 Canola plasma membrane 37.67 39.13
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 37.67 38.94
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 31.63 38.86
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 38.6 38.78
Os12t0159600-01 Rice plastid 38.14 38.68
GSMUA_Achr8P34450_001 Banana plasma membrane 37.21 38.28
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 37.67 38.21
EES16682 Sorghum golgi, plasma membrane, plastid 37.67 37.85
CDY35671 Canola plasma membrane 36.28 37.32
Os11t0157200-03 Rice plasma membrane 36.28 37.14
TraesCS5D01G133300.1 Wheat cytosol 35.81 37.02
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 36.28 36.97
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 30.7 36.87
Zm00001d016733_P001 Maize extracellular, plasma membrane 32.09 36.7
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 36.28 36.62
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 36.28 36.62
CDY09123 Canola plasma membrane 35.35 36.36
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 29.77 36.36
Zm00001d023468_P001 Maize extracellular 35.81 36.15
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 35.81 36.15
EES06921 Sorghum endoplasmic reticulum 35.35 35.85
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 35.35 35.68
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 35.35 35.68
HORVU7Hr1G078320.1 Barley cytosol 35.81 35.65
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 34.42 35.58
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 35.35 35.51
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 35.35 35.19
EES13132 Sorghum cytosol 35.81 35.16
GSMUA_Achr10P... Banana plasma membrane 34.42 35.07
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 34.88 35.05
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 34.88 34.88
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 34.88 34.88
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 34.88 34.88
Zm00001d052776_P001 Maize extracellular 34.42 34.74
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 34.88 34.72
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 34.88 34.72
EES08013 Sorghum golgi, plasma membrane, plastid 34.42 34.58
CDX95339 Canola plasma membrane 47.91 34.56
Os04t0685400-01 Rice golgi, plasma membrane, plastid 34.88 34.09
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 34.88 33.94
Zm00001d026664_P001 Maize extracellular 34.88 33.94
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 34.42 33.48
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 34.42 33.48
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 33.49 33.33
CDY28821 Canola endoplasmic reticulum, nucleus, plasma membrane 33.02 33.33
CDY51789 Canola endoplasmic reticulum, nucleus, plasma membrane 33.02 33.33
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 33.95 33.18
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 33.02 33.18
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 33.02 33.18
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 33.02 33.18
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 34.88 33.04
EES12138 Sorghum extracellular, golgi, plasma membrane 33.95 33.03
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 34.42 32.89
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 33.95 32.59
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 32.56 32.41
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 32.56 32.41
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 32.09 31.94
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 32.09 31.94
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 33.02 31.7
HORVU2Hr1G040910.1 Barley peroxisome 34.88 31.51
CDY14357 Canola plastid 31.16 31.46
CDY20226 Canola endoplasmic reticulum, nucleus, plasma membrane 31.16 31.46
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 32.09 30.94
Os04t0416700-01 Rice golgi, plasma membrane 31.63 30.91
HORVU5Hr1G040160.3 Barley golgi, peroxisome 37.21 29.3
CDX91852 Canola cytosol, peroxisome, plasma membrane 23.72 22.27
CDX74380 Canola cytosol, peroxisome, plasma membrane 23.26 21.83
CDY51712 Canola cytosol, peroxisome, plasma membrane 23.26 21.64
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 20.0 21.61
CDY07145 Canola cytosol, peroxisome, plasma membrane 22.79 21.12
Protein Annotations
EnsemblPlants:CDX81001EnsemblPlantsGene:GSBRNA2T00134432001GO:A0A078CV22PANTHER:PTHR31415PANTHER:PTHR31415:SF2ProteinID:CDX81001
ProteinID:CDX81001.1SEG:segTMHMM:TMhelixUniParc:UPI0004EC004AMapMan:35.1:
Description
BnaC03g02550D
Coordinates
chrLK031823:-:1221342..1221989
Molecular Weight (calculated)
23135.3 Da
IEP (calculated)
9.829
GRAVY (calculated)
0.444
Length
215 amino acids
Sequence
(BLAST)
001: MAVVVKECGS HGSSSPRLLN FLRRNIICLV IFIIVTIIGI VLAWVILHSP KPHFILQDAT VFSFNVSGDP PNVLSSSIQT TLISRNLNGK TGINYDRLDV
101: YASYQSQQIT LPTSIPAAYQ GYEEVNVWSP FIGGKYVPVA RANALSLIQE QSSGGVKVLV HVVGKISWKV GPITRTSDLF VRCPALISFG NSAAGVMVGG
201: RGVKYTLVTV CSVSV
Best Arabidopsis Sequence Match ( AT2G35960.1 )
(BLAST)
001: MTTKDCGNHG GGGGGGTASR ICGVIIGFII IVLITIFLVW IILQPTKPRF ILQDATVYAF NLSQPNLLTS NFQITIASRN RNSRIGIYYD RLHVYATYRN
101: QQITLRTAIP PTYQGHKEDN VWSPFVYGNS VPIAPFNAVA LGDEQNRGFV TLIIRADGRV RWKVGTLITG KYHLHVRCQA FINLADKAAG VHVGENAVKY
201: MLINKCSVNV
Arabidopsis Description
NHL12NDR1/HIN1-like protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ54]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.