Factsheet for GSMUA_AchrUn_randomP27690_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 3
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	26.64	59.38
GSMUA_Achr9P08960_001	Banana	plasma membrane	52.34	53.33
GSMUA_Achr6P19500_001	Banana	endoplasmic reticulum, plasma membrane	50.47	51.18
GSMUA_Achr9P29670_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	42.06	51.14
GSMUA_Achr10P...	Banana	plasma membrane	50.0	50.71
GSMUA_Achr7P03290_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	48.6	48.83
GSMUA_Achr11P...	Banana	cytosol, extracellular, mitochondrion, peroxisome	40.65	48.6
GSMUA_Achr8P34450_001	Banana	plasma membrane	47.2	48.33
CDY29084	Canola	mitochondrion	38.32	47.67
KRG96252	Soybean	plasma membrane	46.73	47.62
CDX90600	Canola	plasma membrane	45.79	47.12
Bra012801.1-P	Field mustard	plasma membrane	45.79	47.12
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	46.73	46.95
AT3G11660.1	Thale cress	plasma membrane	45.79	46.89
KRH32836	Soybean	plasma membrane	45.79	46.89
KRH72197	Soybean	plasma membrane	45.33	46.86
AT2G35960.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	45.79	46.67
CDY72430	Canola	cytosol	45.33	46.63
CDY69513	Canola	plasma membrane	44.86	46.6
AT3G44220.1	Thale cress	plasma membrane	44.86	46.6
Bra035001.1-P	Field mustard	plasma membrane	44.86	46.6
CDY08687	Canola	plasma membrane	44.86	46.6
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	46.26	46.26
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	45.79	46.23
Bra034822.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid	45.79	46.23
PGSC0003DMT400015090	Potato	plasma membrane	44.86	46.15
Solyc06g074040.1.1	Tomato	plasma membrane	44.86	46.15
Bra033428.1-P	Field mustard	cytosol	44.86	46.15
Bra038671.1-P	Field mustard	plasma membrane	45.33	45.97
CDY01043	Canola	mitochondrion	45.33	45.75
Bra006927.1-P	Field mustard	cytosol	44.39	45.67
AT3G52470.1	Thale cress	extracellular, plasma membrane	44.39	45.67
CDY68967	Canola	cytosol	44.39	45.67
CDY69198	Canola	cytosol	44.39	45.67
VIT_06s0080g01200.t01	Wine grape	plasma membrane	44.39	45.67
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	43.93	45.41
CDY32068	Canola	plasma membrane	43.46	45.15
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	43.93	44.55
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	42.99	43.81
CDY40419	Canola	plasma membrane	42.52	43.75
Bra017276.1-P	Field mustard	plasma membrane	42.52	43.75
Solyc11g068890.1.1	Tomato	plasma membrane	42.52	43.54
AT5G06330.1	Thale cress	plasma membrane	42.06	43.48
PGSC0003DMT400050538	Potato	plasma membrane	42.06	43.06
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	42.06	42.65
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	41.59	42.18
CDX92375	Canola	plasma membrane	40.65	42.03
Bra002396.1-P	Field mustard	plasma membrane	40.65	42.03
KRH26671	Soybean	plasma membrane	42.52	41.18
CDY35671	Canola	plasma membrane	40.19	41.15
CDX98590	Canola	plasma membrane	39.72	41.06
GSMUA_Achr4P18020_001	Banana	cytosol, endoplasmic reticulum, golgi, plastid	40.19	40.95
KRH67997	Soybean	plastid	47.66	40.48
KRH22643	Soybean	plasma membrane	41.12	40.37
AT2G35970.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	39.72	40.28
AT4G09590.1	Thale cress	cytosol, plasma membrane, vacuole	39.72	40.28
GSMUA_Achr5P14440_001	Banana	cytosol, endoplasmic reticulum, plasma membrane, plastid	38.78	39.9
CDY09123	Canola	plasma membrane	38.78	39.71
Bra020177.1-P	Field mustard	plasma membrane	37.85	38.76
CDX81001	Canola	plastid	38.78	38.6
CDY55755	Canola	plasma membrane	37.38	37.56
Bra005892.1-P	Field mustard	plasma membrane	37.38	37.56
AT5G05657.1	Thale cress	plastid	22.9	35.77
CDX95339	Canola	plasma membrane	43.93	31.54
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	28.5	30.35

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP27690_001	EnsemblPlants:GSMUA_AchrUn_randomT27690_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG27690_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF2	PFAM:PF03168	SEG:seg	TMHMM:TMhelix
UniParc:UPI000296F3A3	UniProt:M0UCX7	MapMan:35.1	:	:	:

Description

harpin-induced protein 1 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG27690_001]

Coordinates

chrchrUn_random:-:135158613..135159257

Molecular Weight (calculated)

23736.4 Da

IEP (calculated)

7.028

GRAVY (calculated)

0.240

Length

214 amino acids

Sequence
(BLAST)

001: MGKDCDHHHH SSCCECSVCS DHSTLLTIAW VVGAFVLVVL LVVFITWLVL RPTKPIFYLK DATVYQFNLS LSDNILSTVL QATVSSHNPN SRIGVSYDRA
101: SVYVTYQNQQ ITLPTSIPPL YQGHHDINVW SPYLYGASVP VAPSICGSLQ QDEAAGYLLL YLKIDGMVRW KVGTWTSGHY HLEVTCPAFF SFDSTSNGVA
201: VVRFQRMSPC SVSV

Best Arabidopsis Sequence Match ( AT3G11660.1 )
(BLAST)

001: MKDCENHGHS RRKLIRRIFW SIIFVLFIIF LTILLIWAIL QPSKPRFILQ DATVYAFNVS GNPPNLLTSN FQITLSSRNP NNKIGIYYDR LDVYATYRSQ
101: QITFPTSIPP TYQGHKDVDI WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY INFGNKANGV IVGDNAVKYT
201: FTTSCSVSV

Arabidopsis Description

NHL1NDR1/HIN1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRN0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.