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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 2
  • plastid 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc11g068890.1.1 Tomato plasma membrane 93.78 93.78
PGSC0003DMT400015090 Potato plasma membrane 73.21 73.56
Bra035001.1-P Field mustard plasma membrane 55.98 56.8
CDY08687 Canola plasma membrane 55.98 56.8
CDY69513 Canola plasma membrane 55.98 56.8
VIT_06s0080g01200.t01 Wine grape plasma membrane 55.98 56.25
AT3G44220.1 Thale cress plasma membrane 55.02 55.83
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 53.59 52.58
PGSC0003DMT400042351 Potato extracellular, plasma membrane 52.15 51.66
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 43.06 51.43
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 52.63 51.4
PGSC0003DMT400072342 Potato extracellular, plasma membrane 51.67 51.18
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 50.72 50.96
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 50.24 50.48
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 49.76 50.0
Os12t0159600-01 Rice plastid 50.24 49.53
TraesCS5D01G133300.1 Wheat cytosol 49.28 49.52
GSMUA_Achr9P08960_001 Banana plasma membrane 49.28 49.05
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 22.49 48.96
KRH26671 Soybean plasma membrane 51.67 48.87
CDX92375 Canola plasma membrane 48.33 48.79
HORVU7Hr1G078320.1 Barley cytosol 50.24 48.61
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 48.8 48.34
CDX98590 Canola plasma membrane 47.85 48.31
Bra002396.1-P Field mustard plasma membrane 47.85 48.31
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 40.67 48.3
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 49.76 48.15
EES16682 Sorghum golgi, plasma membrane, plastid 49.28 48.13
Os11t0157200-03 Rice plasma membrane 48.33 48.1
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 48.33 48.1
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 49.28 47.69
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 49.28 47.69
GSMUA_Achr10P... Banana plasma membrane 47.85 47.39
EES08013 Sorghum golgi, plasma membrane, plastid 47.37 46.26
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 46.89 46.23
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 46.89 46.01
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 46.89 46.01
CDY35671 Canola plasma membrane 45.93 45.93
CDY09123 Canola plasma membrane 45.93 45.93
KRH22643 Soybean plasma membrane 47.85 45.87
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 39.23 45.81
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 46.41 45.54
Zm00001d023468_P001 Maize extracellular 46.41 45.54
Zm00001d052776_P001 Maize extracellular 46.41 45.54
GSMUA_Achr8P34450_001 Banana plasma membrane 45.45 45.45
EES13132 Sorghum cytosol 47.37 45.21
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 45.93 45.07
Bra020177.1-P Field mustard plasma membrane 44.98 44.98
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 45.45 44.39
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 46.89 44.34
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 44.98 43.93
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 46.41 43.89
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 44.5 43.66
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 45.93 43.64
Os04t0685400-01 Rice golgi, plasma membrane, plastid 45.93 43.64
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 45.93 43.44
Zm00001d026664_P001 Maize extracellular 45.45 42.99
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 46.41 42.73
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 44.98 42.15
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 43.06 42.06
Zm00001d016733_P001 Maize extracellular, plasma membrane 37.32 41.49
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 42.11 40.93
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 42.11 40.74
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 41.63 40.28
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 41.63 40.28
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 41.63 40.28
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 41.15 40.0
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 41.15 40.0
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 42.58 39.56
Os04t0416700-01 Rice golgi, plasma membrane 41.63 39.55
EES12138 Sorghum extracellular, golgi, plasma membrane 41.63 39.37
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 40.19 39.25
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 40.19 39.25
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 40.19 39.25
EES06921 Sorghum endoplasmic reticulum 39.23 38.68
HORVU5Hr1G040160.3 Barley golgi, peroxisome 50.24 38.46
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 39.71 38.43
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 40.19 37.5
PGSC0003DMT400001571 Potato endoplasmic reticulum, nucleus, plasma membrane 37.8 37.09
HORVU2Hr1G040910.1 Barley peroxisome 41.63 36.55
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 38.28 35.71
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 25.36 26.63
PGSC0003DMT400029400 Potato cytosol, peroxisome, plastid, vacuole 27.27 25.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400050538EnsemblPlantsGene:PGSC0003DMG400019639EntrezGene:102591975GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:LEA_2PANTHER:PTHR31415PANTHER:PTHR31415:SF2PFAM:PF03168PGSC:PGSC0003DMG400019639RefSeq:XP_006362852.1
SEG:segTMHMM:TMhelixUniParc:UPI0002955A00UniProt:M1BQH1MapMan:35.1:
Description
Harpin-induced family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400019639]
Coordinates
chr11:-:40730281..40731090
Molecular Weight (calculated)
23688.9 Da
IEP (calculated)
9.584
GRAVY (calculated)
0.115
Length
209 amino acids
Sequence
(BLAST)
001: MTEKDCGHHV DDERHNLQRR LITALIAFVT LILVTILLIF LILRPTKPHF ILQDATVYAF NTSTPFNFLT TNIQITIASR NPNDKIGIYY DKLNVYARYR
101: GQQVTLPTLL PQTYQGHKDV SIWSPFVYGN NVPIAPYLGN AISQDIMFGT ILLNVRIDGR VRWKVGSFIS SKYHLYVNCP AYVGIGGKFL GNSVVVGKYQ
201: LVQNCHVDV
Best Arabidopsis Sequence Match ( AT3G44220.1 )
(BLAST)
001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV
Arabidopsis Description
At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.