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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • golgi 1
  • mitochondrion 1
  • endoplasmic reticulum 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:golgi, mitochondrion, plasma membrane
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
 extracellular: 20408568
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES16682 Sorghum golgi, plasma membrane, plastid 87.79 87.38
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 86.39 86.79
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 70.89 86.29
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 83.57 85.58
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 83.1 85.1
TraesCS5D01G133300.1 Wheat cytosol 77.46 79.33
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 75.12 76.92
Zm00001d052776_P001 Maize extracellular 76.53 76.53
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 69.95 66.82
HORVU5Hr1G040160.3 Barley golgi, peroxisome 83.1 64.84
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 27.7 61.46
GSMUA_Achr9P08960_001 Banana plasma membrane 55.87 56.67
Zm00001d016733_P001 Maize extracellular, plasma membrane 46.48 52.66
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 53.52 50.67
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 52.11 49.55
Zm00001d026664_P001 Maize extracellular 51.17 49.32
PGSC0003DMT400015090 Potato plasma membrane 47.42 48.56
Solyc06g074040.1.1 Tomato plasma membrane 46.95 48.08
CDY29084 Canola mitochondrion 38.03 47.09
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 46.95 46.73
PGSC0003DMT400050538 Potato plasma membrane 45.54 46.41
Solyc11g068890.1.1 Tomato plasma membrane 45.07 45.93
CDY69513 Canola plasma membrane 43.66 45.15
CDY08687 Canola plasma membrane 43.66 45.15
Bra035001.1-P Field mustard plasma membrane 43.66 45.15
Bra002396.1-P Field mustard plasma membrane 43.66 44.93
CDX90600 Canola plasma membrane 43.66 44.71
VIT_06s0080g01200.t01 Wine grape plasma membrane 43.66 44.71
Bra012801.1-P Field mustard plasma membrane 43.19 44.23
Bra006927.1-P Field mustard cytosol 43.19 44.23
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 42.72 43.96
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 44.13 43.93
CDY72430 Canola cytosol 42.72 43.75
CDY69198 Canola cytosol 42.72 43.75
AT3G44220.1 Thale cress plasma membrane 42.25 43.69
CDX92375 Canola plasma membrane 42.25 43.48
CDY68967 Canola cytosol 42.25 43.27
Bra033428.1-P Field mustard cytosol 42.25 43.27
AT3G52470.1 Thale cress extracellular, plasma membrane 42.25 43.27
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 43.19 43.19
CDX98590 Canola plasma membrane 41.78 43.0
AT3G11660.1 Thale cress plasma membrane 41.78 42.58
KRH26671 Soybean plasma membrane 44.13 42.53
AT5G06330.1 Thale cress plasma membrane 41.31 42.51
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 41.78 42.38
AT2G35960.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 41.31 41.9
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 41.31 41.51
KRH22643 Soybean plasma membrane 42.25 41.28
KRH32836 Soybean plasma membrane 40.38 41.15
CDY01043 Canola mitochondrion 40.85 41.04
Bra034822.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid 40.85 41.04
Bra038671.1-P Field mustard plasma membrane 40.38 40.76
KRG96252 Soybean plasma membrane 39.91 40.48
Bra017276.1-P Field mustard plasma membrane 38.97 39.9
CDY40419 Canola plasma membrane 38.97 39.9
CDY32068 Canola plasma membrane 38.5 39.81
KRH72197 Soybean plasma membrane 38.5 39.61
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 38.97 39.34
AT2G35970.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 38.5 38.86
PGSC0003DMT400072342 Potato extracellular, plasma membrane 38.5 38.86
PGSC0003DMT400042351 Potato extracellular, plasma membrane 38.5 38.86
AT4G09590.1 Thale cress cytosol, plasma membrane, vacuole 38.03 38.39
CDY35671 Canola plasma membrane 37.56 38.28
CDY09123 Canola plasma membrane 37.09 37.8
Bra020177.1-P Field mustard plasma membrane 36.15 36.84
CDY55755 Canola plasma membrane 36.15 36.15
CDX81001 Canola plastid 36.15 35.81
Bra005892.1-P Field mustard plasma membrane 35.68 35.68
AT5G05657.1 Thale cress plastid 22.07 34.31
KRH67997 Soybean plastid 40.38 34.13
CDX95339 Canola plasma membrane 41.31 29.53
Zm00001d021289_P001 Maize mitochondrion 29.58 28.77
Zm00001d037915_P001 Maize cytosol, peroxisome, plastid 30.99 25.19
Protein Annotations
EMBL:BT040433EnsemblPlants:Zm00001d023468_P001EnsemblPlants:Zm00001d023468_T001EnsemblPlantsGene:Zm00001d023468EntrezGene:100273203GO:GO:0005575
GO:GO:0016020GO:GO:0016021InterPro:LEA_2PANTHER:PTHR31415PANTHER:PTHR31415:SF11PFAM:PF03168
ProteinID:AQK39349.1SEG:segTMHMM:TMhelixUniParc:UPI00017B77DFUniProt:B4FTJ5MapMan:35.1
Description
NDR1/HIN1-like 1
Coordinates
chr10:-:6631686..6632327
Molecular Weight (calculated)
23230.9 Da
IEP (calculated)
8.201
GRAVY (calculated)
0.135
Length
213 amino acids
Sequence
(BLAST)
001: MGGKDCGNHG EDDLRRSCRR LLAILLVLAL IVGVIALIIY LVVRPTHPRF YLQDASLQQL DLSNSTTPSS SLLSTTLQVT LASRNPNERV GVYYDRLDVY
101: ASYKYQQVTV AAALPAVYQG HGDVDVWSPV LSGPGVPFAP YLADALRQDC QAGYLVLQVK VDGRVRWKVG SWISGHYHLF VTCPAFLVTA GGNGAPGASG
201: FRFQTTTYCH VEV
Best Arabidopsis Sequence Match ( AT3G44220.1 )
(BLAST)
001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV
Arabidopsis Description
At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.