CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 2
extracellular 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22643	Soybean	plasma membrane	82.81	83.94
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	65.16	67.29
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	64.71	67.14
PGSC0003DMT400015090	Potato	plasma membrane	55.2	58.65
Solyc06g074040.1.1	Tomato	plasma membrane	54.75	58.17
VIT_06s0080g01200.t01	Wine grape	plasma membrane	53.85	57.21
Bra035001.1-P	Field mustard	plasma membrane	52.94	56.8
CDY69513	Canola	plasma membrane	52.94	56.8
CDY08687	Canola	plasma membrane	52.49	56.31
AT3G44220.1	Thale cress	plasma membrane	52.49	56.31
PGSC0003DMT400050538	Potato	plasma membrane	48.87	51.67
Solyc11g068890.1.1	Tomato	plasma membrane	48.87	51.67
GSMUA_Achr9P08960_001	Banana	plasma membrane	48.42	50.95
KRH72197	Soybean	plasma membrane	47.51	50.72
GSMUA_Achr10P...	Banana	plasma membrane	47.96	50.24
KRH32836	Soybean	plasma membrane	47.06	49.76
KRG96252	Soybean	plasma membrane	47.06	49.52
Bra002396.1-P	Field mustard	plasma membrane	45.7	48.79
GSMUA_Achr7P03290_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	46.61	48.36
GSMUA_Achr8P34450_001	Banana	plasma membrane	45.7	48.33
CDX98590	Canola	plasma membrane	45.25	48.31
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	20.81	47.92
CDX92375	Canola	plasma membrane	44.8	47.83
TraesCS2B01G603000.1	Wheat	cytosol, golgi, plasma membrane	46.61	46.61
CDY35671	Canola	plasma membrane	43.89	46.41
CDY09123	Canola	plasma membrane	43.89	46.41
GSMUA_Achr11P...	Banana	cytosol, extracellular, mitochondrion, peroxisome	37.56	46.37
HORVU7Hr1G078320.1	Barley	cytosol	45.25	46.3
Zm00001d026664_P001	Maize	extracellular	46.15	46.15
GSMUA_Achr9P29670_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	36.65	46.02
GSMUA_Achr6P19500_001	Banana	endoplasmic reticulum, plasma membrane	43.89	45.97
Bra020177.1-P	Field mustard	plasma membrane	43.44	45.93
TraesCS7B01G227800.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	44.8	45.83
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	43.44	45.71
TraesCS2D01G596200.1	Wheat	cytosol, golgi, plasma membrane	45.7	45.7
TraesCS2A01G583600.1	Wheat	cytosol, golgi, plasma membrane	45.7	45.7
EES13132	Sorghum	cytosol	45.25	45.66
TraesCS7A01G327200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	44.34	45.37
TraesCS7D01G323900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	44.34	45.37
HORVU2Hr1G123370.1	Barley	cytosol, golgi, plasma membrane	44.34	44.55
Zm00001d023468_P001	Maize	extracellular	42.53	44.13
EES16682	Sorghum	golgi, plasma membrane, plastid	42.53	43.93
Zm00001d041927_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	42.08	43.87
EES14353	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	42.08	43.46
TraesCS5D01G133400.1	Wheat	golgi, plasma membrane, plastid	40.72	43.27
TraesCS5A01G125800.1	Wheat	golgi, plasma membrane, plastid	40.72	43.27
Zm00001d016733_P001	Maize	extracellular, plasma membrane	36.65	43.09
Zm00001d034977_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	41.63	42.99
Zm00001d052776_P001	Maize	extracellular	41.18	42.72
TraesCS2A01G297700.1	Wheat	extracellular, plasma membrane	41.63	42.59
HORVU2Hr1G073830.1	Barley	extracellular, plasma membrane	41.63	42.59
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	41.18	42.52
KRH67997	Soybean	plastid	48.42	42.46
Os12t0159600-01	Rice	plastid	40.72	42.45
TraesCS5B01G125000.1	Wheat	cytosol, extracellular, plasma membrane	33.48	42.29
Os04t0685400-01	Rice	golgi, plasma membrane, plastid	42.08	42.27
TraesCS2D01G295700.1	Wheat	extracellular, plasma membrane	41.18	42.13
TraesCS2B01G313900.1	Wheat	extracellular, plasma membrane	41.18	42.13
EES08013	Sorghum	golgi, plasma membrane, plastid	40.72	42.06
TraesCS5D01G133300.1	Wheat	cytosol	39.37	41.83
Os11t0157200-03	Rice	plasma membrane	39.37	41.43
Os08t0102700-01	Rice	cytosol, peroxisome, plasma membrane	42.53	41.41
TraesCS5B01G124900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	38.91	41.35
EES12138	Sorghum	extracellular, golgi, plasma membrane	41.18	41.18
Zm00001d003751_P001	Maize	extracellular, golgi, plasma membrane	41.63	40.89
Zm00001d025371_P001	Maize	extracellular, golgi, plasma membrane	41.18	40.62
EES06921	Sorghum	endoplasmic reticulum	38.91	40.57
TraesCS4D01G113300.1	Wheat	peroxisome, plasma membrane, plastid	38.91	40.38
Os02t0538700-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	40.72	40.18
TraesCS2A01G205300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	38.91	40.0
TraesCS2B01G232700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	38.91	40.0
TraesCS4B01G115700.1	Wheat	peroxisome, plasma membrane, plastid	38.46	39.91
TraesCS4A01G199700.1	Wheat	golgi, plasma membrane, plastid	38.46	39.91
HORVU4Hr1G021190.1	Barley	golgi, plasma membrane, plastid	38.46	39.91
TraesCS2D01G210700.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	38.01	39.07
Os04t0416700-01	Rice	golgi, plasma membrane	38.46	38.64
HORVU5Hr1G114220.1	Barley	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	37.56	38.43
TraesCS5D01G498400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	36.65	37.85
TraesCS5B01G498200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	36.65	37.85
TraesCS5A01G484900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	36.65	37.85
KRH64295	Soybean	plasma membrane	33.94	35.71
HORVU2Hr1G040910.1	Barley	peroxisome	38.01	35.29
TraesCS5A01G125600.1	Wheat	cytosol, peroxisome, plasma membrane	34.84	34.53
HORVU5Hr1G040160.3	Barley	golgi, peroxisome	40.72	32.97
KRG97253	Soybean	endoplasmic reticulum, extracellular, plasma membrane	27.6	30.96
KRH53632	Soybean	plasma membrane	29.86	29.6
KRH68967	Soybean	extracellular, plasma membrane	26.24	29.44
HORVU2Hr1G066420.1	Barley	mitochondrion, plastid	20.81	23.12
KRH47782	Soybean	cytosol	25.79	22.89
KRH06353	Soybean	cytosol	24.89	22.27

Protein Annotations

EntrezGene:100818413	MapMan:35.1	EMBL:ACUP02007734	EnsemblPlantsGene:GLYMA_12G187600	GO:GO:0003674	GO:GO:0004871
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009506	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0046658	UniProt:I1LTY7	EnsemblPlants:KRH26671	ProteinID:KRH26671	ProteinID:KRH26671.1	InterPro:LEA_2
PFAM:PF03168	PANTHER:PTHR31415	PANTHER:PTHR31415:SF51	TMHMM:TMhelix	UniParc:UPI000233D755	SEG:seg

Description

hypothetical protein

Coordinates

chr12:-:34865817..34869986

Molecular Weight (calculated)

24631.9 Da

IEP (calculated)

9.514

GRAVY (calculated)

0.152

Length

221 amino acids

Sequence
(BLAST)

001: MSTKECCHHD EERRQLPRRV FAAILGFILL ILLVIFLIWI ILRPTKPRFI LQDATVYAFN LSSTGDTPSP ITPTPNTLTL TMQVTLAAFN PNHRIGVYYT
101: KLDAYAAYRG QQVSVATSLP ATYQGHRDTS VWSPYLYATA VPVSPFTLQI LQQDKTSGGI LVNVKVNGRV KWKVGTWVSG IYHINVNCPA YLRLAGDRDD
201: AIGFAGPAVK FQLFQTCIVD V

Best Arabidopsis Sequence Match ( AT2G35970.1 )
(BLAST)

001: MTTKECGNHG GGGGGGGTAC RICGAIIGFI IIVLMTIFLV SIILQPKKPE FILQDTTVYA FNLSQPNLLT SKFQITIASR NRNSNIGIYY DHLHAYASYR
101: NQQITLASDL PPTYQRHKEN SVWSPLLYGN QVPIAPFNAV ALGDEQNSGV FTLTICVDGR VRWKVGTLTI GNYHLHVRCQ AFINQADKAA GVHVGENTVK
201: YTLINKCSVN F

Arabidopsis Description

Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:UniProtKB/TrEMBL;Acc:Q9SJ53]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.