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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • extracellular 4
  • plastid 1
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 4
  • golgi 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 99.54 99.54
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 99.54 99.54
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 96.3 96.3
Os04t0416700-01 Rice golgi, plasma membrane 84.72 83.18
EES12138 Sorghum extracellular, golgi, plasma membrane 84.72 82.81
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 83.33 80.0
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 80.09 77.23
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 63.43 63.43
HORVU2Hr1G040910.1 Barley peroxisome 68.06 61.76
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 23.15 52.08
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 48.61 49.3
VIT_06s0080g01200.t01 Wine grape plasma membrane 44.91 46.63
GSMUA_Achr9P08960_001 Banana plasma membrane 43.98 45.24
PGSC0003DMT400015090 Potato plasma membrane 42.13 43.75
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 42.59 43.19
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 42.13 42.52
Solyc06g074040.1.1 Tomato plasma membrane 40.74 42.31
PGSC0003DMT400050538 Potato plasma membrane 40.74 42.11
Bra002396.1-P Field mustard plasma membrane 40.28 42.03
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 40.74 41.9
CDY29084 Canola mitochondrion 33.33 41.86
KRH26671 Soybean plasma membrane 42.59 41.63
Solyc11g068890.1.1 Tomato plasma membrane 40.28 41.63
CDX92375 Canola plasma membrane 39.81 41.55
CDX98590 Canola plasma membrane 39.35 41.06
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 41.67 40.91
CDY08687 Canola plasma membrane 38.89 40.78
Bra035001.1-P Field mustard plasma membrane 38.89 40.78
CDY69513 Canola plasma membrane 38.89 40.78
HORVU7Hr1G078320.1 Barley cytosol 40.74 40.74
AT3G44220.1 Thale cress plasma membrane 38.43 40.29
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 38.43 40.1
KRG96252 Soybean plasma membrane 38.43 39.52
HORVU5Hr1G040160.3 Barley golgi, peroxisome 49.07 38.83
CDY09123 Canola plasma membrane 37.5 38.76
AT5G06330.1 Thale cress plasma membrane 37.04 38.65
CDX90600 Canola plasma membrane 37.04 38.46
AT3G11660.1 Thale cress plasma membrane 37.04 38.28
KRH22643 Soybean plasma membrane 38.43 38.07
Bra006927.1-P Field mustard cytosol 36.57 37.98
Bra012801.1-P Field mustard plasma membrane 36.57 37.98
CDY72430 Canola cytosol 36.57 37.98
Bra038671.1-P Field mustard plasma membrane 37.04 37.91
Bra020177.1-P Field mustard plasma membrane 36.57 37.8
CDY35671 Canola plasma membrane 36.57 37.8
Bra033428.1-P Field mustard cytosol 36.11 37.5
CDY69198 Canola cytosol 36.11 37.5
CDY68967 Canola cytosol 36.11 37.5
AT3G52470.1 Thale cress extracellular, plasma membrane 36.11 37.5
CDY32068 Canola plasma membrane 35.65 37.38
KRH32836 Soybean plasma membrane 36.11 37.32
KRH72197 Soybean plasma membrane 35.19 36.72
Bra017276.1-P Field mustard plasma membrane 35.19 36.54
CDY40419 Canola plasma membrane 35.19 36.54
AT2G35960.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 35.19 36.19
AT2G35970.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 34.72 35.55
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 34.72 35.55
Bra034822.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid 34.72 35.38
CDY01043 Canola mitochondrion 34.72 35.38
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 34.72 35.38
AT4G09590.1 Thale cress cytosol, plasma membrane, vacuole 33.8 34.6
PGSC0003DMT400042351 Potato extracellular, plasma membrane 32.87 33.65
PGSC0003DMT400072342 Potato extracellular, plasma membrane 32.87 33.65
AT5G05657.1 Thale cress plastid 21.3 33.58
CDX81001 Canola plastid 32.41 32.56
Bra005892.1-P Field mustard plasma membrane 31.94 32.39
KRH67997 Soybean plastid 37.5 32.14
CDY55755 Canola plasma membrane 31.02 31.46
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 27.31 29.65
CDX95339 Canola plasma membrane 36.11 26.17
HORVU5Hr1G081610.1 Barley golgi, nucleus, plastid 29.17 23.95
HORVU1Hr1G058400.1 Barley cytosol, endoplasmic reticulum, peroxisome 28.7 23.66
HORVU5Hr1G026690.1 Barley nucleus 20.37 21.15
HORVU6Hr1G083970.1 Barley endoplasmic reticulum, peroxisome, plasma membrane 18.98 20.1
Protein Annotations
EMBL:AK373472EnsemblPlants:HORVU2Hr1G073830.1EnsemblPlantsGene:HORVU2Hr1G073830GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:LEA_2PANTHER:PTHR31415PANTHER:PTHR31415:SF12PFAM:PF03168SEG:segTMHMM:TMhelix
UniParc:UPI0002008514UniProt:F2EBE7MapMan:35.1:::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EBE7]
Coordinates
chrchr2H:+:532996009..532997704
Molecular Weight (calculated)
23271.2 Da
IEP (calculated)
8.689
GRAVY (calculated)
0.276
Length
216 amino acids
Sequence
(BLAST)
001: MSKGKVHHDW ILRRCCGSIA ACILTLAVLV GFVALVIYLA LHPSKPSFYL QDIQLRSIDL SDPALSLDVQ VTIASRNPND RVGIYYKTLH AFTTYRDEPV
101: TVPVSLPAIY QGHKDQSVWS PVMSGDSVPV APYVADAMKQ DIAAGYVLLH VKVDGRVKWK VGSWVSGGYH IFVNCPALLS ASGGSVGGAF AMSATVGGKQ
201: TVSLKFTQPS YCTVDV
Best Arabidopsis Sequence Match ( AT2G35960.1 )
(BLAST)
001: MTTKDCGNHG GGGGGGTASR ICGVIIGFII IVLITIFLVW IILQPTKPRF ILQDATVYAF NLSQPNLLTS NFQITIASRN RNSRIGIYYD RLHVYATYRN
101: QQITLRTAIP PTYQGHKEDN VWSPFVYGNS VPIAPFNAVA LGDEQNRGFV TLIIRADGRV RWKVGTLITG KYHLHVRCQA FINLADKAAG VHVGENAVKY
201: MLINKCSVNV
Arabidopsis Description
NHL12NDR1/HIN1-like protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ54]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.