CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033428.1-P	Field mustard	cytosol	99.52	99.52
CDX90600	Canola	plasma membrane	96.15	96.15
CDY69198	Canola	cytosol	93.75	93.75
CDY68967	Canola	cytosol	93.75	93.75
CDY29084	Canola	mitochondrion	75.48	91.28
AT3G52470.1	Thale cress	extracellular, plasma membrane	87.02	87.02
CDY32068	Canola	plasma membrane	75.96	76.7
CDY40419	Canola	plasma membrane	75.48	75.48
CDX95339	Canola	plasma membrane	96.15	67.11
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	66.83	65.57
CDY01043	Canola	mitochondrion	66.35	65.09
KRH72197	Soybean	plasma membrane	56.25	56.52
KRH32836	Soybean	plasma membrane	56.73	56.46
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	55.29	55.56
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	56.25	55.45
KRG96252	Soybean	plasma membrane	55.29	54.76
CDY08687	Canola	plasma membrane	53.37	53.88
CDY69513	Canola	plasma membrane	53.37	53.88
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	53.85	53.08
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	52.4	51.66
CDY55755	Canola	plasma membrane	52.88	51.64
CDX81001	Canola	plastid	51.44	49.77
GSMUA_Achr9P08960_001	Banana	plasma membrane	48.08	47.62
GSMUA_Achr10P...	Banana	plasma membrane	47.6	46.92
CDY35671	Canola	plasma membrane	46.63	46.41
CDX92375	Canola	plasma membrane	46.15	46.38
CDX98590	Canola	plasma membrane	46.15	46.38
TraesCS5A01G125800.1	Wheat	golgi, plasma membrane, plastid	46.15	46.15
TraesCS5D01G133400.1	Wheat	golgi, plasma membrane, plastid	46.15	46.15
GSMUA_Achr8P34450_001	Banana	plasma membrane	46.15	45.93
Os11t0157200-03	Rice	plasma membrane	46.15	45.71
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	46.63	45.33
KRH67997	Soybean	plastid	54.81	45.24
TraesCS5B01G125000.1	Wheat	cytosol, extracellular, plasma membrane	37.98	45.14
GSMUA_Achr11P...	Banana	cytosol, extracellular, mitochondrion, peroxisome	38.46	44.69
TraesCS4B01G115700.1	Wheat	peroxisome, plasma membrane, plastid	45.67	44.6
HORVU4Hr1G021190.1	Barley	golgi, plasma membrane, plastid	45.67	44.6
CDY09123	Canola	plasma membrane	44.71	44.5
TraesCS4A01G199700.1	Wheat	golgi, plasma membrane, plastid	45.19	44.13
Zm00001d052776_P001	Maize	extracellular	45.19	44.13
TraesCS4D01G113300.1	Wheat	peroxisome, plasma membrane, plastid	45.19	44.13
GSMUA_Achr7P03290_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	45.19	44.13
EES16682	Sorghum	golgi, plasma membrane, plastid	45.19	43.93
GSMUA_Achr9P29670_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	37.02	43.75
Os12t0159600-01	Rice	plastid	44.23	43.4
TraesCS5B01G124900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	43.27	43.27
GSMUA_Achr6P19500_001	Banana	endoplasmic reticulum, plasma membrane	43.75	43.13
TraesCS7B01G227800.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	44.71	43.06
TraesCS5D01G133300.1	Wheat	cytosol	42.79	42.79
Zm00001d023468_P001	Maize	extracellular	43.75	42.72
HORVU7Hr1G078320.1	Barley	cytosol	44.23	42.59
TraesCS7A01G327200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	44.23	42.59
TraesCS7D01G323900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	44.23	42.59
Zm00001d041927_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	43.27	42.45
Zm00001d034977_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	41.83	40.65
EES08013	Sorghum	golgi, plasma membrane, plastid	41.83	40.65
EES13132	Sorghum	cytosol	42.79	40.64
Os04t0685400-01	Rice	golgi, plasma membrane, plastid	42.79	40.45
Zm00001d026664_P001	Maize	extracellular	42.79	40.27
Zm00001d016733_P001	Maize	extracellular, plasma membrane	36.06	39.89
EES14353	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	40.38	39.25
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	17.79	38.54
TraesCS2D01G596200.1	Wheat	cytosol, golgi, plasma membrane	40.87	38.46
TraesCS2B01G603000.1	Wheat	cytosol, golgi, plasma membrane	40.38	38.01
TraesCS2A01G583600.1	Wheat	cytosol, golgi, plasma membrane	40.38	38.01
Os08t0102700-01	Rice	cytosol, peroxisome, plasma membrane	40.87	37.44
EES06921	Sorghum	endoplasmic reticulum	37.98	37.26
TraesCS5A01G125600.1	Wheat	cytosol, peroxisome, plasma membrane	39.9	37.22
HORVU2Hr1G123370.1	Barley	cytosol, golgi, plasma membrane	38.94	36.82
TraesCS2B01G232700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	37.98	36.74
TraesCS2D01G210700.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	37.98	36.74
TraesCS2A01G205300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	37.98	36.74
HORVU2Hr1G073830.1	Barley	extracellular, plasma membrane	37.98	36.57
TraesCS2D01G295700.1	Wheat	extracellular, plasma membrane	37.5	36.11
TraesCS2B01G313900.1	Wheat	extracellular, plasma membrane	37.5	36.11
TraesCS2A01G297700.1	Wheat	extracellular, plasma membrane	37.5	36.11
Zm00001d003751_P001	Maize	extracellular, golgi, plasma membrane	38.94	36.0
HORVU5Hr1G040160.3	Barley	golgi, peroxisome	46.63	35.53
TraesCS5A01G484900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	36.54	35.51
TraesCS5B01G498200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	36.54	35.51
TraesCS5D01G498400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	36.54	35.51
EES12138	Sorghum	extracellular, golgi, plasma membrane	37.5	35.29
Os04t0416700-01	Rice	golgi, plasma membrane	37.02	35.0
Os02t0538700-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	37.02	34.38
CDY51789	Canola	endoplasmic reticulum, nucleus, plasma membrane	35.1	34.27
CDY14357	Canola	plastid	35.1	34.27
CDY28821	Canola	endoplasmic reticulum, nucleus, plasma membrane	35.1	34.27
HORVU5Hr1G114220.1	Barley	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	35.58	34.26
Zm00001d025371_P001	Maize	extracellular, golgi, plasma membrane	36.54	33.93
CDY20226	Canola	endoplasmic reticulum, nucleus, plasma membrane	34.13	33.33
HORVU2Hr1G040910.1	Barley	peroxisome	37.98	33.19
HORVU2Hr1G066420.1	Barley	mitochondrion, plastid	23.56	24.62
CDX91852	Canola	cytosol, peroxisome, plasma membrane	26.92	24.45
CDY51712	Canola	cytosol, peroxisome, plasma membrane	26.92	24.24
CDX74380	Canola	cytosol, peroxisome, plasma membrane	26.44	24.02
CDY07145	Canola	cytosol, peroxisome, plasma membrane	25.96	23.28

Protein Annotations

EnsemblPlants:CDY72430	EnsemblPlantsGene:GSBRNA2T00029647001	GO:A9NI57	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF2	PFAM:PF03168	ProteinID:CDY72430	ProteinID:CDY72430.1
SEG:seg	TMHMM:TMhelix	unigene:Bna.14903	UniParc:UPI0000D52883	UniProt:A9NI57	MapMan:35.1

Description

BnaAnng41110DBnaAnng41110D protein [Source:UniProtKB/TrEMBL;Acc:A9NI57]

Coordinates

chrLK050980:-:111..823

Molecular Weight (calculated)

23038.2 Da

IEP (calculated)

10.202

GRAVY (calculated)

0.163

Length

208 amino acids

Sequence
(BLAST)

001: MSKDCGNHGG GKEAAVRRIC AAVIAFIIIV LITIFLVWVI LRPTKPRFIL QEATVFAFNL SQPNLLTTNF QITFASRNPN SKIGIYYDRL HVYATYRNQQ
101: ITLRTAIPPT YQGHKEDNVW SPFVYGTAVP IAPYNSVALG DEQGHGLVQL MIRADGRVRW KVGTLITGKY HIHVRCPALI NLGNKAAGVI VGDNAVKYTL
201: VTKCSVNV

Best Arabidopsis Sequence Match ( AT3G52470.1 )
(BLAST)

001: MSKDCGNHGG GKEVVVRKLC AAIIAFIVIV LITIFLVWVI LRPTKPRFVL QDATVYAFNL SQPNLLTSNF QVTIASRNPN SKIGIYYDRL HVYATYMNQQ
101: ITLRTAIPPT YQGHKEVNVW SPFVYGTAVP IAPYNSVALG EEKDRGFVGL MIRADGTVRW KVRTLITGKY HIHVRCQAFI NLGNKAAGVL VGDNAVKYTL
201: ANKCSVNV

Arabidopsis Description

Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:UniProtKB/TrEMBL;Acc:Q9SVC8]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.