Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5B01G124900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 92.79 | 92.79 |
TraesCS5D01G133400.1 | Wheat | golgi, plasma membrane, plastid | 88.46 | 88.46 |
TraesCS5A01G125600.1 | Wheat | cytosol, peroxisome, plasma membrane | 86.06 | 80.27 |
EES16682 | Sorghum | golgi, plasma membrane, plastid | 81.73 | 79.44 |
Os12t0159600-01 | Rice | plastid | 80.29 | 78.77 |
Zm00001d023468_P001 | Maize | extracellular | 79.33 | 77.46 |
TraesCS4D01G113300.1 | Wheat | peroxisome, plasma membrane, plastid | 74.52 | 72.77 |
HORVU5Hr1G040160.3 | Barley | golgi, peroxisome | 89.42 | 68.13 |
GSMUA_Achr6P35580_001 | Banana | cytosol, extracellular, plastid | 26.92 | 58.33 |
GSMUA_Achr9P08960_001 | Banana | plasma membrane | 56.25 | 55.71 |
TraesCS5D01G498400.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 53.37 | 51.87 |
TraesCS2D01G210700.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 50.96 | 49.3 |
PGSC0003DMT400050538 | Potato | plasma membrane | 49.52 | 49.28 |
PGSC0003DMT400015090 | Potato | plasma membrane | 48.08 | 48.08 |
Solyc11g068890.1.1 | Tomato | plasma membrane | 48.08 | 47.85 |
TraesCS2D01G295700.1 | Wheat | extracellular, plasma membrane | 49.52 | 47.69 |
Solyc06g074040.1.1 | Tomato | plasma membrane | 47.6 | 47.6 |
TraesCS2D01G596200.1 | Wheat | cytosol, golgi, plasma membrane | 50.0 | 47.06 |
TraesCS7D01G323900.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 48.08 | 46.3 |
CDY69513 | Canola | plasma membrane | 45.67 | 46.12 |
Bra035001.1-P | Field mustard | plasma membrane | 45.67 | 46.12 |
CDY29084 | Canola | mitochondrion | 37.98 | 45.93 |
VIT_08s0007g02350.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 45.67 | 45.89 |
VIT_06s0080g01200.t01 | Wine grape | plasma membrane | 45.67 | 45.67 |
CDY08687 | Canola | plasma membrane | 45.19 | 45.63 |
Bra002396.1-P | Field mustard | plasma membrane | 45.19 | 45.41 |
AT3G44220.1 | Thale cress | plasma membrane | 43.75 | 44.17 |
CDX92375 | Canola | plasma membrane | 43.75 | 43.96 |
AT5G06330.1 | Thale cress | plasma membrane | 43.27 | 43.48 |
CDX98590 | Canola | plasma membrane | 43.27 | 43.48 |
AT5G22200.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 43.75 | 43.33 |
CDX90600 | Canola | plasma membrane | 43.27 | 43.27 |
CDY08506 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 43.75 | 42.92 |
Bra034822.1-P | Field mustard | extracellular, mitochondrion, plasma membrane, plastid | 43.75 | 42.92 |
CDY69198 | Canola | cytosol | 42.79 | 42.79 |
Bra012801.1-P | Field mustard | plasma membrane | 42.79 | 42.79 |
CDY72430 | Canola | cytosol | 42.79 | 42.79 |
Bra006927.1-P | Field mustard | cytosol | 42.79 | 42.79 |
AT3G11660.1 | Thale cress | plasma membrane | 42.79 | 42.58 |
CDY01043 | Canola | mitochondrion | 43.27 | 42.45 |
Bra033428.1-P | Field mustard | cytosol | 42.31 | 42.31 |
CDY68967 | Canola | cytosol | 42.31 | 42.31 |
AT3G52470.1 | Thale cress | extracellular, plasma membrane | 42.31 | 42.31 |
Bra038671.1-P | Field mustard | plasma membrane | 42.79 | 42.18 |
Solyc01g007220.2.1 | Tomato | extracellular, plasma membrane | 42.79 | 42.18 |
KRH30370 | Soybean | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 43.27 | 42.06 |
AT2G35960.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 42.31 | 41.9 |
KRH25304 | Soybean | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 42.79 | 41.78 |
PGSC0003DMT400042351 | Potato | extracellular, plasma membrane | 42.31 | 41.71 |
KRG96252 | Soybean | plasma membrane | 41.83 | 41.43 |
PGSC0003DMT400072342 | Potato | extracellular, plasma membrane | 41.83 | 41.23 |
CDY35671 | Canola | plasma membrane | 40.87 | 40.67 |
CDY32068 | Canola | plasma membrane | 39.42 | 39.81 |
KRH32836 | Soybean | plasma membrane | 39.9 | 39.71 |
KRH22643 | Soybean | plasma membrane | 41.35 | 39.45 |
KRH26671 | Soybean | plasma membrane | 41.83 | 39.37 |
CDY09123 | Canola | plasma membrane | 39.42 | 39.23 |
Bra017276.1-P | Field mustard | plasma membrane | 38.94 | 38.94 |
CDY40419 | Canola | plasma membrane | 38.94 | 38.94 |
AT2G35970.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 39.42 | 38.86 |
KRH72197 | Soybean | plasma membrane | 38.46 | 38.65 |
AT4G09590.1 | Thale cress | cytosol, plasma membrane, vacuole | 38.94 | 38.39 |
Bra020177.1-P | Field mustard | plasma membrane | 38.46 | 38.28 |
CDY55755 | Canola | plasma membrane | 37.02 | 36.15 |
CDX81001 | Canola | plastid | 37.02 | 35.81 |
Bra005892.1-P | Field mustard | plasma membrane | 36.54 | 35.68 |
KRH67997 | Soybean | plastid | 42.31 | 34.92 |
AT5G05657.1 | Thale cress | plastid | 22.12 | 33.58 |
TraesCS5D01G326100.1 | Wheat | cytosol, plasma membrane, vacuole | 34.13 | 31.7 |
CDX95339 | Canola | plasma membrane | 41.35 | 28.86 |
TraesCS5D01G110800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 27.88 | 28.16 |
TraesCS7D01G429800.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane, plastid | 25.48 | 26.24 |
TraesCS7D01G429700.1 | Wheat | endoplasmic reticulum | 25.48 | 26.11 |
TraesCS1D01G233500.1 | Wheat | peroxisome | 30.29 | 22.91 |
TraesCS6D01G332300.1 | Wheat | plastid | 27.88 | 22.75 |
Protein Annotations
EnsemblPlants:TraesCS5D01G133300.1 | EnsemblPlantsGene:TraesCS5D01G133300 | InterPro:LEA_2 | PANTHER:PTHR31415 | PANTHER:PTHR31415:SF11 | PFAM:PF03168 |
SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5D:+:212627256..212627882
Molecular Weight (calculated)
22794.3 Da
IEP (calculated)
7.959
GRAVY (calculated)
0.061
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKDCGNHHH DHFRNGCRRL LKVLLGLAFI LAVIALIVYL VLRPTHPGFF LQDASLRQLD LSNSTGLLST SLQVTVASRN PNDRVGVYYD RLDVYASYKD
101: QQITVAASLP AVYQGHGDVD VWSPVLDGPN VPFAPYLASA ISQDCQAGHL VLHVKIDGRV RWKVGSWISG HYHLFVTCQA LLETVSGNGA PEASGFKFQK
201: TTGCHVEV
101: QQITVAASLP AVYQGHGDVD VWSPVLDGPN VPFAPYLASA ISQDCQAGHL VLHVKIDGRV RWKVGSWISG HYHLFVTCQA LLETVSGNGA PEASGFKFQK
201: TTGCHVEV
001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV
Arabidopsis Description
At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.