Factsheet for HORVU5Hr1G040160.3

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi

Predictor Summary:

golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome
Any Predictor:	golgi
MultiLoc:	golgi
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G125800.1	Wheat	golgi, plasma membrane, plastid	75.09	98.56
TraesCS5B01G125000.1	Wheat	cytosol, extracellular, plasma membrane	63.0	98.29
TraesCS5D01G133400.1	Wheat	golgi, plasma membrane, plastid	74.73	98.08
TraesCS5D01G133300.1	Wheat	cytosol	68.13	89.42
TraesCS5B01G124900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	67.4	88.46
EES16682	Sorghum	golgi, plasma membrane, plastid	67.77	86.45
Os12t0159600-01	Rice	plastid	66.67	85.85
Zm00001d023468_P001	Maize	extracellular	64.84	83.1
HORVU4Hr1G021190.1	Barley	golgi, plasma membrane, plastid	62.64	80.28
TraesCS5A01G125600.1	Wheat	cytosol, peroxisome, plasma membrane	62.27	76.23
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	21.61	61.46
GSMUA_Achr9P08960_001	Banana	plasma membrane	44.69	58.1
HORVU5Hr1G114220.1	Barley	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	41.39	52.31
HORVU2Hr1G040910.1	Barley	peroxisome	43.96	50.42
PGSC0003DMT400050538	Potato	plasma membrane	38.46	50.24
PGSC0003DMT400015090	Potato	plasma membrane	38.1	50.0
HORVU7Hr1G078320.1	Barley	cytosol	39.56	50.0
HORVU2Hr1G073830.1	Barley	extracellular, plasma membrane	38.83	49.07
CDY29084	Canola	mitochondrion	30.77	48.84
Solyc11g068890.1.1	Tomato	plasma membrane	37.36	48.8
Solyc06g074040.1.1	Tomato	plasma membrane	37.0	48.56
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	36.63	48.31
Bra002396.1-P	Field mustard	plasma membrane	36.26	47.83
HORVU2Hr1G123370.1	Barley	cytosol, golgi, plasma membrane	38.46	47.73
CDX90600	Canola	plasma membrane	36.26	47.6
Bra012801.1-P	Field mustard	plasma membrane	35.9	47.12
VIT_06s0080g01200.t01	Wine grape	plasma membrane	35.9	47.12
Bra006927.1-P	Field mustard	cytosol	35.9	47.12
CDY69513	Canola	plasma membrane	35.53	47.09
Bra035001.1-P	Field mustard	plasma membrane	35.53	47.09
CDY69198	Canola	cytosol	35.53	46.63
CDY72430	Canola	cytosol	35.53	46.63
CDY08687	Canola	plasma membrane	35.16	46.6
CDX92375	Canola	plasma membrane	35.16	46.38
AT3G52470.1	Thale cress	extracellular, plasma membrane	35.16	46.15
CDY68967	Canola	cytosol	35.16	46.15
Bra033428.1-P	Field mustard	cytosol	35.16	46.15
CDX98590	Canola	plasma membrane	34.8	45.89
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	35.16	45.71
AT3G44220.1	Thale cress	plasma membrane	34.43	45.63
AT2G35960.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	34.8	45.24
AT3G11660.1	Thale cress	plasma membrane	34.43	44.98
KRG96252	Soybean	plasma membrane	34.07	44.29
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	34.07	44.08
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	34.07	44.08
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	34.07	44.08
AT5G06330.1	Thale cress	plasma membrane	33.33	43.96
Bra034822.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid	34.07	43.87
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	34.07	43.87
Bra038671.1-P	Field mustard	plasma membrane	33.7	43.6
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	34.07	43.46
CDY01043	Canola	mitochondrion	33.7	43.4
CDY32068	Canola	plasma membrane	32.23	42.72
Bra017276.1-P	Field mustard	plasma membrane	32.23	42.31
CDY40419	Canola	plasma membrane	32.23	42.31
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	32.97	42.25
KRH32836	Soybean	plasma membrane	32.23	42.11
CDY35671	Canola	plasma membrane	32.23	42.11
KRH72197	Soybean	plasma membrane	31.5	41.55
AT2G35970.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	31.87	41.23
AT4G09590.1	Thale cress	cytosol, plasma membrane, vacuole	31.5	40.76
KRH26671	Soybean	plasma membrane	32.97	40.72
CDY09123	Canola	plasma membrane	31.14	40.67
KRH22643	Soybean	plasma membrane	32.23	40.37
Bra020177.1-P	Field mustard	plasma membrane	30.4	39.71
KRH67997	Soybean	plastid	34.8	37.7
CDY55755	Canola	plasma membrane	29.3	37.56
CDX81001	Canola	plastid	29.3	37.21
Bra005892.1-P	Field mustard	plasma membrane	28.94	37.09
HORVU2Hr1G066420.1	Barley	mitochondrion, plastid	26.01	35.68
AT5G05657.1	Thale cress	plastid	17.58	35.04
CDX95339	Canola	plasma membrane	34.43	31.54
HORVU6Hr1G083970.1	Barley	endoplasmic reticulum, peroxisome, plasma membrane	22.71	30.39
HORVU5Hr1G026690.1	Barley	nucleus	22.71	29.81
HORVU5Hr1G081610.1	Barley	golgi, nucleus, plastid	25.27	26.24
HORVU1Hr1G058400.1	Barley	cytosol, endoplasmic reticulum, peroxisome	24.54	25.57

Protein Annotations

EnsemblPlants:HORVU5Hr1G040160.3	EnsemblPlantsGene:HORVU5Hr1G040160	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:LEA_2
PANTHER:PTHR31415	PANTHER:PTHR31415:SF11	PFAM:PF03168	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B488FBA
UniProt:A0A287QX22	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:295088747..295090693

Molecular Weight (calculated)

30080.0 Da

IEP (calculated)

8.957

GRAVY (calculated)

-0.142

Length

273 amino acids

Sequence
(BLAST)

001: GIEGREPING VTRKLNLPCF PNTTGPAPDH LLRSSHYTSE PLRIRTHRRH NQITREPTDQ SSQLAMGKDC GNHGDDHLRN GCRRLLAVLL GLAFIVAIIA
101: LIVYLVLRPT HPRFFLQDAS LRQLNLSNSS GLLSTSLQVT VASRNPNDRV GVYYDRLDVY ASYKYQQITV AASLPPVYQG HGDVDVWSPV LDGPNVPFAP
201: YLASAISQDC QAGYLILQVK IDGRVRWKVG SWISGHYHLF VTCPAFLVTS GGNGAPGASG FKFQTTTYCH VEV

Best Arabidopsis Sequence Match ( AT3G11660.1 )
(BLAST)

001: MKDCENHGHS RRKLIRRIFW SIIFVLFIIF LTILLIWAIL QPSKPRFILQ DATVYAFNVS GNPPNLLTSN FQITLSSRNP NNKIGIYYDR LDVYATYRSQ
101: QITFPTSIPP TYQGHKDVDI WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY INFGNKANGV IVGDNAVKYT
201: FTTSCSVSV

Arabidopsis Description

NHL1NDR1/HIN1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRN0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.