Factsheet for Zm00001d016733_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 5
endoplasmic reticulum 4
vacuole 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06921	Sorghum	endoplasmic reticulum	93.09	82.55
TraesCS5B01G498200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	78.72	69.16
TraesCS5A01G484900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	78.19	68.69
TraesCS2D01G210700.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	78.19	68.37
TraesCS5D01G498400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	77.66	68.22
TraesCS2B01G232700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	77.66	67.91
TraesCS2A01G205300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	77.66	67.91
HORVU5Hr1G114220.1	Barley	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	76.6	66.67
Os02t0538700-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	78.72	66.07
HORVU2Hr1G040910.1	Barley	peroxisome	79.26	62.6
Zm00001d003751_P001	Maize	extracellular, golgi, plasma membrane	67.02	56.0
Zm00001d025371_P001	Maize	extracellular, golgi, plasma membrane	65.43	54.91
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	27.13	53.12
Zm00001d041927_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	53.19	47.17
Zm00001d023468_P001	Maize	extracellular	52.66	46.48
GSMUA_Achr9P08960_001	Banana	plasma membrane	51.6	46.19
Zm00001d052776_P001	Maize	extracellular	51.06	45.07
VIT_06s0080g01200.t01	Wine grape	plasma membrane	46.28	41.83
Bra002396.1-P	Field mustard	plasma membrane	45.74	41.55
CDX92375	Canola	plasma membrane	45.74	41.55
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	46.28	41.43
PGSC0003DMT400015090	Potato	plasma membrane	45.74	41.35
Solyc06g074040.1.1	Tomato	plasma membrane	45.21	40.87
Bra035001.1-P	Field mustard	plasma membrane	44.68	40.78
CDY69513	Canola	plasma membrane	44.68	40.78
CDY08687	Canola	plasma membrane	44.68	40.78
CDX98590	Canola	plasma membrane	44.68	40.58
AT3G44220.1	Thale cress	plasma membrane	44.15	40.29
Zm00001d026664_P001	Maize	extracellular	47.34	40.27
CDY29084	Canola	mitochondrion	36.7	40.12
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	45.21	39.91
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	45.21	39.72
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	43.09	39.13
CDY09123	Canola	plasma membrane	42.55	38.28
KRH32836	Soybean	plasma membrane	42.55	38.28
KRG96252	Soybean	plasma membrane	42.55	38.1
Bra020177.1-P	Field mustard	plasma membrane	42.02	37.8
AT5G06330.1	Thale cress	plasma membrane	41.49	37.68
CDX90600	Canola	plasma membrane	41.49	37.5
PGSC0003DMT400050538	Potato	plasma membrane	41.49	37.32
CDY35671	Canola	plasma membrane	41.49	37.32
Solyc11g068890.1.1	Tomato	plasma membrane	41.49	37.32
Bra012801.1-P	Field mustard	plasma membrane	40.96	37.02
AT3G11660.1	Thale cress	plasma membrane	40.96	36.84
KRH26671	Soybean	plasma membrane	43.09	36.65
Zm00001d034977_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	41.49	36.45
KRH72197	Soybean	plasma membrane	39.89	36.23
CDY72430	Canola	cytosol	39.89	36.06
CDY69198	Canola	cytosol	39.89	36.06
Bra006927.1-P	Field mustard	cytosol	39.89	36.06
CDY68967	Canola	cytosol	39.89	36.06
CDY32068	Canola	plasma membrane	39.36	35.92
Bra017276.1-P	Field mustard	plasma membrane	39.36	35.58
Bra033428.1-P	Field mustard	cytosol	39.36	35.58
CDY40419	Canola	plasma membrane	39.36	35.58
Bra038671.1-P	Field mustard	plasma membrane	39.89	35.55
KRH22643	Soybean	plasma membrane	40.96	35.32
AT2G35960.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	39.36	35.24
AT3G52470.1	Thale cress	extracellular, plasma membrane	38.83	35.1
CDY01043	Canola	mitochondrion	37.23	33.02
Bra034822.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid	37.23	33.02
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	36.7	32.55
CDY55755	Canola	plasma membrane	36.7	32.39
Bra005892.1-P	Field mustard	plasma membrane	36.7	32.39
AT2G35970.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	36.17	32.23
CDX81001	Canola	plastid	36.7	32.09
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	35.64	31.75
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	35.64	31.75
KRH67997	Soybean	plastid	42.02	31.35
AT4G09590.1	Thale cress	cytosol, plasma membrane, vacuole	35.11	31.28
AT5G05657.1	Thale cress	plastid	22.34	30.66
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	34.04	30.33
Zm00001d021289_P001	Maize	mitochondrion	34.57	29.68
CDX95339	Canola	plasma membrane	37.77	23.83
Zm00001d037915_P001	Maize	cytosol, peroxisome, plastid	30.85	22.14

Protein Annotations

EnsemblPlants:Zm00001d016733_P001	EnsemblPlants:Zm00001d016733_T001	EnsemblPlantsGene:Zm00001d016733	InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF15
PFAM:PF03168	ProteinID:AQK71568.1	TMHMM:TMhelix	UniParc:UPI000842DECE	UniProt:A0A1D6HA35	MapMan:35.1

Description

NDR1/HIN1-like 1

Coordinates

chr5:+:174537324..174537890

Molecular Weight (calculated)

20337.6 Da

IEP (calculated)

9.094

GRAVY (calculated)

0.354

Length

188 amino acids

Sequence
(BLAST)

001: MASCLLALVL IVAFVSLVVY LALRPSKPSF YLQDLQLRRP ISLGDPSLTA SAQVTLASRN PNDRVGIFYK RLDVFVTYRD EAVTVPVSLP PQYQGHRDFT
101: VWSPVLSAES VPVAAYVADA MKQDVAAGFV ALQVKVDGRV KWKVGSWVSG SYHLFVSCPA VLSAGYPGVN NTVTSLKFAQ PTGCSVEV

Best Arabidopsis Sequence Match ( AT5G22200.1 )
(BLAST)

001: MTGRYCDQHN GYEERRMRMM MRRIAWACLG LIVAVAFVVF LVWAILHPHG PRFVLQDVTI NDFNVSQPNF LSSNLQVTVS SRNPNDKIGI FYDRLDIYVT
101: YRNQEVTLAR LLPSTYQGHL EVTVWSPFLI GSAVPVAPYL SSALNEDLFA GLVLLNIKID GWVRWKVGSW VSGSYRLHVN CPAFITVTGK LTGTGPAIKY
201: QLVQRCAVDV

Arabidopsis Description

Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:UniProtKB/TrEMBL;Acc:Q9C568]
SUBAcon: [cytosol,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.