Factsheet for TraesCS7B01G227800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G323900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	99.54	99.54
TraesCS7A01G327200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	99.54	99.54
HORVU7Hr1G078320.1	Barley	cytosol	98.15	98.15
Zm00001d034977_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	73.61	74.3
EES14353	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	72.69	73.36
Os08t0102700-01	Rice	cytosol, peroxisome, plasma membrane	73.61	70.04
TraesCS2B01G603000.1	Wheat	cytosol, golgi, plasma membrane	63.89	62.44
GSMUA_Achr9P29670_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	44.44	54.55
GSMUA_Achr10P...	Banana	plasma membrane	52.31	53.55
TraesCS5B01G125000.1	Wheat	cytosol, extracellular, plasma membrane	43.06	53.14
GSMUA_Achr11P...	Banana	cytosol, extracellular, mitochondrion, peroxisome	43.06	51.96
TraesCS4B01G115700.1	Wheat	peroxisome, plasma membrane, plastid	50.46	51.17
PGSC0003DMT400050538	Potato	plasma membrane	48.15	49.76
GSMUA_Achr6P19500_001	Banana	endoplasmic reticulum, plasma membrane	48.15	49.29
GSMUA_Achr8P34450_001	Banana	plasma membrane	47.69	49.28
Solyc11g068890.1.1	Tomato	plasma membrane	47.22	48.8
PGSC0003DMT400015090	Potato	plasma membrane	46.76	48.56
Solyc06g074040.1.1	Tomato	plasma membrane	46.76	48.56
TraesCS5B01G124900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	44.91	46.63
Bra035001.1-P	Field mustard	plasma membrane	44.44	46.6
CDY08687	Canola	plasma membrane	44.44	46.6
CDY69513	Canola	plasma membrane	44.44	46.6
GSMUA_Achr7P03290_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	45.83	46.48
AT3G44220.1	Thale cress	plasma membrane	43.52	45.63
KRH72197	Soybean	plasma membrane	43.06	44.93
KRH26671	Soybean	plasma membrane	45.83	44.8
KRG96252	Soybean	plasma membrane	43.52	44.76
AT3G52470.1	Thale cress	extracellular, plasma membrane	43.06	44.71
CDY72430	Canola	cytosol	43.06	44.71
VIT_06s0080g01200.t01	Wine grape	plasma membrane	42.59	44.23
Bra012801.1-P	Field mustard	plasma membrane	42.59	44.23
Bra033428.1-P	Field mustard	cytosol	42.59	44.23
CDX90600	Canola	plasma membrane	42.59	44.23
CDY29084	Canola	mitochondrion	35.19	44.19
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	43.06	44.08
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	43.06	44.08
KRH32836	Soybean	plasma membrane	42.59	44.02
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	42.59	43.81
Bra006927.1-P	Field mustard	cytosol	41.67	43.27
CDY32068	Canola	plasma membrane	41.2	43.2
AT3G11660.1	Thale cress	plasma membrane	41.67	43.06
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	41.2	43.0
AT5G06330.1	Thale cress	plasma membrane	41.2	43.0
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	42.59	42.99
CDY68967	Canola	cytosol	41.2	42.79
CDY69198	Canola	cytosol	41.2	42.79
AT2G35960.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	41.2	42.38
Bra038671.1-P	Field mustard	plasma membrane	40.74	41.71
TraesCS2B01G232700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	41.2	41.4
Bra017276.1-P	Field mustard	plasma membrane	39.81	41.35
CDY40419	Canola	plasma membrane	39.81	41.35
Bra034822.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid	40.28	41.04
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	40.28	41.04
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	40.28	40.85
Bra002396.1-P	Field mustard	plasma membrane	38.89	40.58
CDY01043	Canola	mitochondrion	39.81	40.57
KRH22643	Soybean	plasma membrane	40.74	40.37
TraesCS2B01G313900.1	Wheat	extracellular, plasma membrane	40.28	40.28
CDX92375	Canola	plasma membrane	38.43	40.1
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	38.89	39.81
CDX98590	Canola	plasma membrane	37.96	39.61
AT4G09590.1	Thale cress	cytosol, plasma membrane, vacuole	38.43	39.34
TraesCS5B01G498200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	38.89	39.25
AT2G35970.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	37.96	38.86
CDY35671	Canola	plasma membrane	36.11	37.32
CDY55755	Canola	plasma membrane	36.57	37.09
KRH67997	Soybean	plastid	43.06	36.9
Bra005892.1-P	Field mustard	plasma membrane	36.11	36.62
CDY09123	Canola	plasma membrane	35.19	36.36
AT5G05657.1	Thale cress	plastid	22.69	35.77
Bra020177.1-P	Field mustard	plasma membrane	34.26	35.41
CDX81001	Canola	plastid	35.19	35.35
TraesCS6B01G383000.1	Wheat	endoplasmic reticulum	29.17	30.88
TraesCS5B01G320400.1	Wheat	cytosol, plasma membrane, vacuole	31.94	30.67
CDX95339	Canola	plasma membrane	41.67	30.2
TraesCS5B01G103800.1	Wheat	cytosol	27.31	28.1
TraesCS1B01G245500.1	Wheat	cytosol	31.94	27.27

Protein Annotations

EnsemblPlants:TraesCS7B01G227800.1	EnsemblPlantsGene:TraesCS7B01G227800	InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF7	PFAM:PF03168
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr7B:+:428039409..428040878

Molecular Weight (calculated)

23657.8 Da

IEP (calculated)

9.340

GRAVY (calculated)

0.317

Length

216 amino acids

Sequence
(BLAST)

001: MSIKHCDKHD CERRRLYRQF CAALVAVILL ILLIILIVWL VLRPTRPRFY LNGLTVACLN ATSSPASYLT VTLQATIAAR NPNSRVGIYF DRTDAYAEYK
101: GQQVTVPTAL PVVYQGHLDV SVWSPFLVGS NVPLAPYLAV ALAQDETAGY VLLTVRVDGW IRWKAGAFIT GHYHLRVRCP ALLTVNGGQG SYGSIAGGGG
201: NGYFNFQRAA PCVVDV

Best Arabidopsis Sequence Match ( AT3G11660.1 )
(BLAST)

001: MKDCENHGHS RRKLIRRIFW SIIFVLFIIF LTILLIWAIL QPSKPRFILQ DATVYAFNVS GNPPNLLTSN FQITLSSRNP NNKIGIYYDR LDVYATYRSQ
101: QITFPTSIPP TYQGHKDVDI WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY INFGNKANGV IVGDNAVKYT
201: FTTSCSVSV

Arabidopsis Description

NHL1NDR1/HIN1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRN0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.