CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38448	Canola	plastid	95.76	95.52
AT5G17630.1	Thale cress	plastid	87.03	83.69
PGSC0003DMT400094749	Potato	plastid	71.32	67.77
Solyc01g081390.2.1	Tomato	plastid	70.82	67.3
KRH32944	Soybean	plastid	68.33	65.39
VIT_15s0024g01440.t01	Wine grape	plastid	69.58	65.34
KRH13965	Soybean	plastid	68.08	65.31
GSMUA_Achr6P01190_001	Banana	plastid	64.34	58.37
CDY34641	Canola	plastid	40.9	45.18
CDY52572	Canola	plastid	43.89	45.13
CDY55220	Canola	plastid	43.14	44.7
CDY43022	Canola	plastid	43.14	44.36
CDY17274	Canola	plastid	45.14	43.72
CDY25324	Canola	plastid	42.89	43.54
CDY19859	Canola	plastid	44.89	43.48
CDY06630	Canola	plastid	44.39	39.38
CDY28750	Canola	plastid	43.89	39.11
CDX74305	Canola	plastid	34.16	35.86
CDX91942	Canola	plastid	34.16	35.77
CDY33455	Canola	plastid	34.66	34.15
CDY48790	Canola	mitochondrion	34.16	33.99
CDX77632	Canola	plastid	34.41	33.5
CDY12390	Canola	plastid	33.42	33.33
CDY47555	Canola	plastid	33.42	32.92
CDY04362	Canola	plastid	19.2	32.22
CDY53419	Canola	mitochondrion	34.41	26.85

Protein Annotations

MapMan:24.2.1.1.1	MapMan:9.1.2.1.2	GO:A0A078FQZ2	UniProt:A0A078FQZ2	EnsemblPlants:CDY16905	ProteinID:CDY16905
ProteinID:CDY16905.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00094816001	PFAM:PF03151
PANTHER:PTHR43973	PANTHER:PTHR43973:SF7	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix
InterPro:Tpt_PEP_transl	UniParc:UPI0004EC4CCE	SEG:seg	:	:	:

Description

BnaC09g40320DBnaC09g40320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQZ2]

Coordinates

chrLK032068:-:248568..249773

Molecular Weight (calculated)

44196.1 Da

IEP (calculated)

10.146

GRAVY (calculated)

0.360

Length

401 amino acids

Sequence
(BLAST)

001: MISLNLSASL NPGLTRIRQN PTRFSALHAA AAADKPFSCQ YPLSLPQIPN LQIREKPFLS ITKRSRSVPA AANPDGGESE SEEAAKKEKK AKNLQLGIVF
101: GLWYFQNIVF NIFNKKALNV FPYPWLLASF QLFAGSVWML VLWSFKLYPC PKISKPFIVA LLGPALFHTV GHISACVSFS KVAVSFTHVI KSAEPVFSVI
201: FSSFLGDTYP LAVWLSILPI VMGCSLAAVT EVSFNLGGLS GAMISNVGFV LRNIYSKRSL QSFKEIDGLN LYGCISILSL VYLFPVAVFV EGSQWVQGYH
301: KAIASVGKPW TFYFWVLLSG VFYHLYNQSS YQALDEISPL TFSVGNTMKR VVVIVSTVLV FRNPVRPLNA LGSAIAIFGT FLYSQATAKK KKIEAGDDKK
401: N

Best Arabidopsis Sequence Match ( AT5G17630.1 )
(BLAST)

001: MISLNLSPSL NPGLLHKTRT CQQPTRLSAL LVTNPKPFNH RHPLGLSPIP NLQIRDVSAK PLLSLTNPES SSGFSRKPRS IAAVGSSDSN PDEKSDLGEA
101: EKKEKKAKTL QLGIVFGLWY FQNIVFNIFN KKALNVFPYP WLLASFQLFA GSIWMLVLWS FKLYPCPKIS KPFIIALLGP ALFHTIGHIS ACVSFSKVAV
201: SFTHVIKSAE PVFSVIFSSL LGDSYPLAVW LSILPIVMGC SLAAVTEVSF NLGGLSGAMI SNVGFVLRNI YSKRSLQSFK EIDGLNLYGC ISILSLLYLF
301: PVAIFVEGSH WVPGYHKAIA SVGTPSTFYF WVLLSGVFYH LYNQSSYQAL DEISPLTFSV GNTMKRVVVI ISTVLVFRNP VRPLNALGSA IAIFGTFLYS
401: QATAKKKKIE VGGDKKN

Arabidopsis Description

XPTXylulose 5-phosphate/phosphate translocator, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF61]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.