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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY16905 Canola plastid 83.69 87.03
Bra013962.1-P Field mustard plastid 82.01 85.29
CDY38448 Canola plastid 82.01 85.07
VIT_15s0024g01440.t01 Wine grape plastid 69.06 67.45
KRH13965 Soybean plastid 67.39 67.22
KRH32944 Soybean plastid 66.91 66.59
PGSC0003DMT400094749 Potato plastid 66.91 66.11
Solyc01g081390.2.1 Tomato plastid 66.19 65.4
GSMUA_Achr6P01190_001 Banana plastid 60.91 57.47
AT5G54800.1 Thale cress plastid 43.65 46.91
AT4G03950.1 Thale cress plasma membrane 29.26 44.04
AT1G61800.2 Thale cress plastid 40.53 41.22
AT3G01550.1 Thale cress mitochondrion, plastid 32.13 34.99
AT5G46110.4 Thale cress mitochondrion 32.61 32.77
AT5G33320.1 Thale cress plastid 30.7 31.37
Protein Annotations
MapMan:24.2.1.1.1EntrezGene:831629MapMan:9.1.2.1.2UniProt:A0A178U7B1ProteinID:AAG48163.1ProteinID:AED92450.1
EMBL:AF372964ArrayExpress:AT5G17630EnsemblPlantsGene:AT5G17630RefSeq:AT5G17630TAIR:AT5G17630RefSeq:AT5G17630-TAIR-G
EnsemblPlants:AT5G17630.1TAIR:AT5G17630.1Unigene:At.70135EMBL:BT000586ProteinID:CAC01907.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006810
GO:GO:0008150GO:GO:0008643GO:GO:0009507GO:GO:0009536GO:GO:0009941GO:GO:0015120
GO:GO:0015713GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0031969GO:GO:0035436
GO:GO:0055085GO:GO:0071917RefSeq:NP_197265.1ProteinID:OAO89529.1PFAM:PF03151PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PANTHER:PTHR43973
PANTHER:PTHR43973:SF7UniProt:Q9LF61SUPFAM:SSF103481InterPro:Sugar_P_trans_domTIGRFAMs:TIGR00817TMHMM:TMhelix
InterPro:Tpt_PEP_translUniParc:UPI00000A009BSEG:seg:::
Description
XPTXylulose 5-phosphate/phosphate translocator, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF61]
Coordinates
chr5:+:5809334..5810962
Molecular Weight (calculated)
45772.2 Da
IEP (calculated)
10.223
GRAVY (calculated)
0.337
Length
417 amino acids
Sequence
(BLAST)
001: MISLNLSPSL NPGLLHKTRT CQQPTRLSAL LVTNPKPFNH RHPLGLSPIP NLQIRDVSAK PLLSLTNPES SSGFSRKPRS IAAVGSSDSN PDEKSDLGEA
101: EKKEKKAKTL QLGIVFGLWY FQNIVFNIFN KKALNVFPYP WLLASFQLFA GSIWMLVLWS FKLYPCPKIS KPFIIALLGP ALFHTIGHIS ACVSFSKVAV
201: SFTHVIKSAE PVFSVIFSSL LGDSYPLAVW LSILPIVMGC SLAAVTEVSF NLGGLSGAMI SNVGFVLRNI YSKRSLQSFK EIDGLNLYGC ISILSLLYLF
301: PVAIFVEGSH WVPGYHKAIA SVGTPSTFYF WVLLSGVFYH LYNQSSYQAL DEISPLTFSV GNTMKRVVVI ISTVLVFRNP VRPLNALGSA IAIFGTFLYS
401: QATAKKKKIE VGGDKKN
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.