CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32944	Soybean	plastid	95.45	95.23
VIT_15s0024g01440.t01	Wine grape	plastid	72.25	70.73
Bra013962.1-P	Field mustard	plastid	65.55	68.33
CDY38448	Canola	plastid	65.55	68.16
CDY16905	Canola	plastid	65.31	68.08
Solyc01g081390.2.1	Tomato	plastid	68.42	67.77
PGSC0003DMT400094749	Potato	plastid	68.42	67.77
AT5G17630.1	Thale cress	plastid	67.22	67.39
GSMUA_Achr6P01190_001	Banana	plastid	58.61	55.43
KRH11399	Soybean	plastid	42.11	45.01
KRH20881	Soybean	plastid	41.87	44.76
KRH73710	Soybean	plastid	41.15	43.54
KRG98852	Soybean	plastid	40.91	43.4
KRH14442	Soybean	plastid	40.91	43.29
KRH46103	Soybean	mitochondrion	40.67	43.04
KRH63546	Soybean	endoplasmic reticulum, mitochondrion, plastid	33.25	35.1
KRH03277	Soybean	plastid	31.82	34.82
KRH20388	Soybean	plastid	33.25	34.24
KRH50117	Soybean	mitochondrion, plastid	33.25	34.24
KRH54382	Soybean	endoplasmic reticulum, mitochondrion, plastid	33.25	34.24
KRG93252	Soybean	plastid	33.01	33.82
KRH02096	Soybean	plastid	42.82	29.64
KRH75852	Soybean	cytosol, endoplasmic reticulum, plastid	24.64	29.1

Protein Annotations

EntrezGene:100101869	MapMan:24.2.1.1.1	MapMan:9.1.2.1.2	EMBL:ACUP02009806	EnsemblPlantsGene:GLYMA_15G275300	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	UniProt:K7ME91	EnsemblPlants:KRH13965	ProteinID:KRH13965	ProteinID:KRH13965.1
PFAM:PF03151	PANTHER:PTHR43973	PANTHER:PTHR43973:SF7	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817
TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI00023D7133	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr15:-:51371577..51373491

Molecular Weight (calculated)

46376.9 Da

IEP (calculated)

10.349

GRAVY (calculated)

0.339

Length

418 amino acids

Sequence
(BLAST)

001: MLSSNVVPSS SPVTFSKPNH HFFINASPNP KPNLLRFQAQ HRATPLKSSK LSFMPTSQIQ HSIAKLGSFS RFLSHPFGLS SKPRYQIVKA ASEANPEGEN
101: VAPTEPNSKN LKLGLVFGLW YFQNIVFNIY NKKVLNIFPF PWLLASFQLF VGSIWMLVLW SLKLQPCPKI SKPFIIALLG PALFHTIGHI SACVSFSKVA
201: VSFTHVIKSA EPVFSVMFSS VLGDKYPIQV WLSILPIVLG CSLAAVTEVS FNVQGLWCAL ISNVGFVLRN IYSKRSLQNF KEVDGLNLYG WITILSLLYL
301: FPVAIFVEGS QWIPGYYKAI EAIGKASTFY TWVLVSGVFY HLYNQSSYQA LDEISPLTFS VGNTMKRVVV IVSSVLVFRN PVRPLNGLGS AIAILGTFLY
401: SQATSKKKAM KIEGEKSS

Best Arabidopsis Sequence Match ( AT5G17630.1 )
(BLAST)

001: MISLNLSPSL NPGLLHKTRT CQQPTRLSAL LVTNPKPFNH RHPLGLSPIP NLQIRDVSAK PLLSLTNPES SSGFSRKPRS IAAVGSSDSN PDEKSDLGEA
101: EKKEKKAKTL QLGIVFGLWY FQNIVFNIFN KKALNVFPYP WLLASFQLFA GSIWMLVLWS FKLYPCPKIS KPFIIALLGP ALFHTIGHIS ACVSFSKVAV
201: SFTHVIKSAE PVFSVIFSSL LGDSYPLAVW LSILPIVMGC SLAAVTEVSF NLGGLSGAMI SNVGFVLRNI YSKRSLQSFK EIDGLNLYGC ISILSLLYLF
301: PVAIFVEGSH WVPGYHKAIA SVGTPSTFYF WVLLSGVFYH LYNQSSYQAL DEISPLTFSV GNTMKRVVVI ISTVLVFRNP VRPLNALGSA IAIFGTFLYS
401: QATAKKKKIE VGGDKKN

Arabidopsis Description

XPTXylulose 5-phosphate/phosphate translocator, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF61]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.