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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 6
  • peroxisome 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, peroxisome, plasma membrane, plastid
BaCelLo:plastid
EpiLoc:plastid
iPSORT:plastid
MultiLoc:peroxisome
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:plastid
 mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG98852 Soybean plastid 98.23 98.48
Os07t0523600-01 Rice plastid 60.25 86.55
Os07t0523965-01 Rice plasma membrane 60.25 86.55
OQU90029 Sorghum cytosol, plasma membrane, vacuole 54.43 86.35
KRH14442 Soybean plastid 80.0 80.0
VIT_19s0177g00300.t01 Wine grape plastid 78.48 79.69
KRH73710 Soybean plastid 78.23 78.23
GSMUA_Achr10P... Banana endoplasmic reticulum, extracellular 12.41 77.78
KRH11399 Soybean plastid 74.43 75.19
KRH20881 Soybean plastid 74.43 75.19
GSMUA_Achr7P03380_001 Banana plastid 74.43 74.81
GSMUA_Achr9P11730_001 Banana plastid 74.43 73.32
Solyc03g031740.1.1 Tomato plastid 69.11 71.65
TraesCS2A01G220400.1 Wheat plastid 68.61 70.57
TraesCS2B01G245900.1 Wheat plastid 68.35 70.31
GSMUA_Achr8P07300_001 Banana mitochondrion, plastid 77.22 70.11
GSMUA_Achr4P33530_001 Banana plastid 72.41 69.08
Zm00001d021653_P001 Maize plastid 67.59 68.29
GSMUA_Achr10P... Banana cytosol, plasma membrane, plastid 70.89 63.21
Zm00001d006511_P002 Maize plastid 67.34 63.18
TraesCS2D01G226000.2 Wheat plastid 68.1 60.72
HORVU2Hr1G045900.2 Barley plastid 68.61 59.56
Os07t0523400-01 Rice plasma membrane 35.44 49.3
KRH02096 Soybean plastid 73.67 48.18
KRH75852 Soybean cytosol, endoplasmic reticulum, plastid 38.99 43.5
KRH32944 Soybean plastid 43.29 40.81
KRH13965 Soybean plastid 43.04 40.67
KRH03277 Soybean plastid 33.42 34.55
KRH50117 Soybean mitochondrion, plastid 33.67 32.76
KRH20388 Soybean plastid 33.67 32.76
KRH63546 Soybean endoplasmic reticulum, mitochondrion, plastid 32.66 32.58
KRH54382 Soybean endoplasmic reticulum, mitochondrion, plastid 33.16 32.27
KRG93252 Soybean plastid 33.16 32.11
Protein Annotations
MapMan:24.2.1.1.1EntrezGene:732659EMBL:ACUP02005318EMBL:BT098051UniProt:C6TK46EnsemblPlantsGene:GLYMA_08G312400
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlants:KRH46103ProteinID:KRH46103ProteinID:KRH46103.1
ProteinID:KRH46104.1PFAM:PF03151PANTHER:PTHR43973PANTHER:PTHR43973:SF1SUPFAM:SSF103481InterPro:Sugar_P_trans_dom
TIGRFAMs:TIGR00817TMHMM:TMhelixInterPro:Tpt_PEP_translUniParc:UPI00003DADBFSEG:seg:
Description
hypothetical protein
Coordinates
chr8:-:43212246..43216934
Molecular Weight (calculated)
42964.8 Da
IEP (calculated)
9.916
GRAVY (calculated)
0.435
Length
395 amino acids
Sequence
(BLAST)
001: MISSLRQPVV GISGSDLLLR QRHATLIKAR SFLPSLSREK GQRSLVSVQK PLHIAASLGV GNFVSVKSDD DKRGDLVKCE AYEADRSEVE GASTPSEAAK
101: KVKIGIYFAT WWALNVVFNI YNKKVLNAYP YPWLTSTLSL ACGSLMMLIS WATGIAEAPK TDPEFWKSLF PVAVAHTIGH VAATVSMSKV AVSFTHIIKS
201: GEPAFSVLVS RFLLGESFPV PVYLSLIPII GGCALAAVTE LNFNMIGFMG AMISNLAFVF RNIFSKKGMK GKSVSGMNYY ACLSILSLAI LTPFAIAVEG
301: PQMWAAGWQT AMSQIGPQFI WWLAAQSVFY HLYNQVSYMS LDQISPLTFS IGNTMKRISV IVSSIIIFHT PVQPINALGA AIAILGTFLY SQAKL
Best Arabidopsis Sequence Match ( AT5G54800.1 )
(BLAST)
001: MVLSVKQTLS PKIGLFRRNP SSSLGRSPVS LSFPSTELPK RTVLAVSKPL HLSSSLRAKS PVVRCEAYEA DRSEPHPIGD DAAAAETKSE AAKKLKIGIY
101: FATWWALNVV FNIYNKKVLN AYPYPWLTST LSLAAGSLMM LISWAVGIVE TPKTDFDFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFILGET FPTSVYLSLI PIIGGCALSA LTELNFNMIG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMLS LLILTPFAIA VEGPQMWVDG
301: WQTALATVGP QFVWWVVAQS VFYHLYNQVS YMSLDQISPL TFSVGNTMKR ISVIVSSIII FRTPVQPVNA LGAAIAILGT FLYSQAKL
Arabidopsis Description
GPT1GPT1 [Source:UniProtKB/TrEMBL;Acc:A0A178UL59]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.