CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, endoplasmic reticulum, plastid

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plastid
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014284	Potato	mitochondrion	27.12	66.67
OQU90029	Sorghum	cytosol, plasma membrane, vacuole	41.53	59.04
Os07t0523600-01	Rice	plastid	40.96	52.73
Os07t0523965-01	Rice	plasma membrane	40.96	52.73
GSMUA_Achr2P14020_001	Banana	vacuole	28.53	42.26
KRH20881	Soybean	plastid	46.05	41.69
KRH11399	Soybean	plastid	45.76	41.43
KRG98852	Soybean	plastid	43.79	39.34
KRH46103	Soybean	mitochondrion	43.5	38.99
Zm00001d021653_P001	Maize	plastid	42.66	38.62
TraesCS2A01G220400.1	Wheat	plastid	41.53	38.28
TraesCS2B01G245900.1	Wheat	plastid	41.24	38.02
Solyc07g052450.1.1	Tomato	plastid	21.47	37.81
KRH14442	Soybean	plastid	40.68	36.46
KRH73710	Soybean	plastid	40.4	36.2
Zm00001d006511_P002	Maize	plastid	41.81	35.15
TraesCS2D01G226000.2	Wheat	plastid	40.96	32.73
HORVU2Hr1G045900.2	Barley	plastid	41.24	32.09
KRH02096	Soybean	plastid	45.48	26.66
KRH13965	Soybean	plastid	29.1	24.64
KRH32944	Soybean	plastid	28.53	24.11
KRH03277	Soybean	plastid	24.01	22.25
KRH63546	Soybean	endoplasmic reticulum, mitochondrion, plastid	23.16	20.71
KRH54382	Soybean	endoplasmic reticulum, mitochondrion, plastid	23.45	20.44
KRG93252	Soybean	plastid	23.45	20.34
KRH50117	Soybean	mitochondrion, plastid	22.03	19.21
KRH20388	Soybean	plastid	22.03	19.21
Os07t0523400-01	Rice	plasma membrane	12.99	16.2

Protein Annotations

Gene3D:2.130.10.10	MapMan:24.2.1.1.1	UniProt:A0A0R0L9D8	EMBL:ACUP02000511	EnsemblPlantsGene:GLYMA_01G114500	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	EnsemblPlants:KRH75852	ProteinID:KRH75852	ProteinID:KRH75852.1	PFAM:PF03151
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR43973	PANTHER:PTHR43973:SF1	SMART:SM00320
SUPFAM:SSF50978	InterPro:Sugar_P_trans_dom	TMHMM:TMhelix	UniParc:UPI0006ED8533	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:39599383..39603444

Molecular Weight (calculated)

39187.8 Da

IEP (calculated)

8.627

GRAVY (calculated)

0.225

Length

354 amino acids

Sequence
(BLAST)

001: MHACLKASHC KASARDIPTI NNVEQNTGPS QLCSEKPLYL SSTENLALKG EPTFSVLVSR FLLGKAFPIP VYLSLLPIIG GGALAAVTKL NFNMIEKTLD
101: NVSGFTGAMI SNLEFVYCNI FSKKGMKGMS ISGMNNYSCF SIMLLSILTT FAIVVEDPKV WAAGWQTNVS QIGPNFVWWV AAQSVFYHLY NQVPYTSLDQ
201: ISPLTFSIGN TMKRILPINV LGIAIAILGT FLYSQDRTTC VWRLPDLVCN LVWSKNVNEL VSTHGYSQNY IIVWRYPSMS KLATLTGHTY KVLYVAISPE
301: GHTIVTGVGD ETLRFWNVMA PSLTLERHKF MANLRKMFHE VVVVTSDGTN DGPT

Best Arabidopsis Sequence Match ( AT1G61800.1 )
(BLAST)

001: MLSSIKPSSS SFSTAISGSV RRSIPTKLKF SPLLIIKNCH NQSFNANVVS HQKPLHISSA SNFKREVKVE AYEADRSRPL DINIELPDEQ SAQKLKIGIY
101: FATWWALNVV FNIYNKKVLN AFPYPWLTST LSLACGSLMM LVSWATRIAD APKTDLEFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFFMGET FPLPVYLSLL PIIGGCALAA ITELNFNITG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMMS LVILTPFSIA VEGPQMWAAG
301: WQNAVSQVGP NFVWWVVAQS VFYHLYNQVS YMSLDQISPL TFSIGNTMKR ISVIVASIII FHTPIQPVNA LGAAIAIFGT FLYSQAKQ

Arabidopsis Description

GPT2glucose-6-phosphate/phosphate translocator 2 [Source:TAIR;Acc:AT1G61800]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.