Factsheet for Solyc01g081390.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400094749	Potato	plastid	97.16	97.16
CDY16905	Canola	plastid	67.3	70.82
Bra013962.1-P	Field mustard	plastid	66.59	70.07
CDY38448	Canola	plastid	66.59	69.9
KRH13965	Soybean	plastid	67.77	68.42
KRH32944	Soybean	plastid	67.06	67.54
AT5G17630.1	Thale cress	plastid	65.4	66.19
VIT_15s0024g01440.t01	Wine grape	plastid	66.11	65.34
GSMUA_Achr6P01190_001	Banana	plastid	59.48	56.79
Solyc07g064270.2.1	Tomato	plastid	39.34	42.03
Solyc03g031740.1.1	Tomato	plastid	37.91	41.99
Solyc05g045670.2.1	Tomato	plastid	39.1	41.15
Solyc07g052450.1.1	Tomato	plastid	17.3	36.32
Solyc03g112870.2.1	Tomato	plastid	33.65	34.63
Solyc02g086650.2.1	Tomato	plastid	31.28	33.25
Solyc01g010350.2.1	Tomato	plastid	31.04	31.95
Solyc10g008980.2.1	Tomato	plastid	30.57	31.08

Protein Annotations

MapMan:24.2.1.1.1	MapMan:9.1.2.1.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	UniProt:K4AY31
PFAM:PF03151	PANTHER:PTHR43973	PANTHER:PTHR43973:SF7	SUPFAM:SSF103481	EnsemblPlantsGene:Solyc01g081390.2	EnsemblPlants:Solyc01g081390.2.1
InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI0002762B75	SEG:seg

Description

Xylulose 5-phosphate/phosphate translocator, chloroplastic [Source:Projected from Arabidopsis thaliana (AT5G17630) UniProtKB/Swiss-Prot;Acc:Q9LF61]

Coordinates

chr1:+:80601294..80603099

Molecular Weight (calculated)

46782.2 Da

IEP (calculated)

10.246

GRAVY (calculated)

0.308

Length

422 amino acids

Sequence
(BLAST)

001: MLTLNLLPST NVTLSKSRPN YPVSPSPFQP NLGSRNQKLR TLSFTKPLIQ NGHPFRSSAN QDSQISGPRL DFSRILRHPS GVSSRNTTQI LEAASGTPEE
101: VSPDGEIEVS KPKVNMKLVL IFGLWYFQNI VFNIFNKKVL NIFPYPWLLA SFQLFCGAVW MLILWSSKLQ PCPKINKSFI IALLGPALFH TIGHISACVS
201: FSKVAVSFTH VIKSAEPVFT VVFSSFLGDT YPLTVWLSIL PIVFGCSLAA VTEVSFNFGG LSGAMISNVG FVLRNIFSKR SLQNFKEVDG LNLYGWITII
301: SFIYLFPVAV FVEGSQWVAG YHKALGTIGN PNTFYLWVLI SGIFYHLYNQ SSYQALDDIS PLTFSVGNTM KRVVVIVATV LVFRNPVRPL NALGSAIAIF
401: GTFLYSQATV KKPKKEAVEK KD

Best Arabidopsis Sequence Match ( AT5G17630.1 )
(BLAST)

001: MISLNLSPSL NPGLLHKTRT CQQPTRLSAL LVTNPKPFNH RHPLGLSPIP NLQIRDVSAK PLLSLTNPES SSGFSRKPRS IAAVGSSDSN PDEKSDLGEA
101: EKKEKKAKTL QLGIVFGLWY FQNIVFNIFN KKALNVFPYP WLLASFQLFA GSIWMLVLWS FKLYPCPKIS KPFIIALLGP ALFHTIGHIS ACVSFSKVAV
201: SFTHVIKSAE PVFSVIFSSL LGDSYPLAVW LSILPIVMGC SLAAVTEVSF NLGGLSGAMI SNVGFVLRNI YSKRSLQSFK EIDGLNLYGC ISILSLLYLF
301: PVAIFVEGSH WVPGYHKAIA SVGTPSTFYF WVLLSGVFYH LYNQSSYQAL DEISPLTFSV GNTMKRVVVI ISTVLVFRNP VRPLNALGSA IAIFGTFLYS
401: QATAKKKKIE VGGDKKN

Arabidopsis Description

XPTXylulose 5-phosphate/phosphate translocator, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF61]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.